Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1048
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    32   0.49 
07_01_0781 - 6051139-6052305                                           29   4.6  
05_01_0511 + 4256220-4256828,4256920-4257175,4257247-4257309,425...    29   4.6  
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    29   4.6  
02_05_0212 - 26808484-26809368                                         29   4.6  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    29   6.1  
10_08_0818 + 20801061-20801298,20801409-20801509,20801600-208018...    28   8.1  
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550...    28   8.1  

>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 154 TRPGTGPHPLPVQTRHAPVLRANPYSEVTDPICRLPL 44
           T+P +  H L +  RH P L+A P S +    C+LPL
Sbjct: 100 TKPLSTGHSLIIPKRHFPSLQATPPSVIAAICCKLPL 136


>07_01_0781 - 6051139-6052305
          Length = 388

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 737 HKWEIVFARSSLKKPLTFHCFHL 805
           H WE + +R   +K + F CFHL
Sbjct: 300 HSWEPILSRLVARKNILFPCFHL 322


>05_01_0511 +
           4256220-4256828,4256920-4257175,4257247-4257309,
           4257397-4257491
          Length = 340

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -2

Query: 165 HEHRPDPAPXR-IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 31
           H HRP P P R  R P       S+ P++ P    QF      H+S
Sbjct: 278 HVHRPTPPPHRGFRAPFTTPPSTSTPPVVPPTGFAQFGTTQAAHFS 323


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 133 HPLPVQTRHAPVLRANP 83
           H +PVQ  H+PVL+ NP
Sbjct: 340 HSVPVQKNHSPVLKTNP 356


>02_05_0212 - 26808484-26809368
          Length = 294

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -3

Query: 797 NNGK*VVFSATNARKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVV 636
           +N K V  S++++ K  P  A+  +SP   R +  +  +S P  SP PVPL  V
Sbjct: 47  HNHKNVSSSSSSSSKAKPA-ASSKVSPAKPR-KPKAKAASVPPSSPPPVPLGPV 98


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 127 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 14
           +P Q + A  + A+P + V    C LP P+LF  L  L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329


>10_08_0818 +
           20801061-20801298,20801409-20801509,20801600-20801817,
           20802461-20802824
          Length = 306

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 541 LS*GSQMPRHLISDAHEWINEIPTVPYLLSSETTAKGTGLGESAGKE 681
           LS   Q P H      E +  +P  PY L +    +G+G G   G+E
Sbjct: 114 LSNTEQYPGHHDEIDMELLGTVPGEPYTLQTNVYVRGSGDGNIVGRE 160


>04_01_0416 -
           5504415-5504590,5509032-5509116,5509190-5509322,
           5509426-5510312
          Length = 426

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 779 VFSATNARKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 624
           + + T+  +   +   PL+ P  AR   SSTGSSFP  S  P    ++ L S
Sbjct: 31  ILNLTSHHRLDRSKFLPLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,980,782
Number of Sequences: 37544
Number of extensions: 554904
Number of successful extensions: 1860
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)