Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1048
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    27   0.71 
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    27   0.71 
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.7  

>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = -3

Query: 782 VVFSATNARKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GTVGI 603
           VV+     R RS     PL   Y   L            SP+P P+ V++ D    T+G 
Sbjct: 153 VVYERMKQRARSEESCVPL--EYLKELHELHENWLIHGASPRPAPVLVLNADLDLNTIGA 210

Query: 602 SLIHSCASLIR 570
               S  S+++
Sbjct: 211 EYERSETSILK 221


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = -3

Query: 782 VVFSATNARKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GTVGI 603
           VV+     R RS     PL   Y   L            SP+P P+ V++ D    T+G 
Sbjct: 154 VVYERMKQRARSEESCVPL--EYLKELHELHENWLIHGASPRPAPVLVLNADLDLNTIGA 211

Query: 602 SLIHSCASLIR 570
               S  S+++
Sbjct: 212 EYERSETSILK 222


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 135 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 40
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 376 PLNGGRTESCRSRTKRNR 323
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,104
Number of Sequences: 2352
Number of extensions: 18201
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)