Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1047
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031020-1|AAH31020.1| 250|Homo sapiens interferon, gamma-induc... 57 6e-08
BC021136-1|AAH21136.1| 250|Homo sapiens interferon, gamma-induc... 57 6e-08
AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon induci... 57 6e-08
AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein. 57 6e-08
J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducibl... 49 1e-05
BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A dehydro... 30 6.3
AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein. 30 6.3
AK097425-1|BAC05046.1| 492|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK092356-1|BAC03869.1| 890|Homo sapiens protein ( Homo sapiens ... 30 6.3
>BC031020-1|AAH31020.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 56.8 bits (131), Expect = 6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCM 194
+ LN+ + PYG A+ +G++EF CQHG EEC NK+ AC +D + ++ +A + CM
Sbjct: 92 EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCM 149
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 278 IKRCAKGDRGDELLKKYGD--ESKKANYLFVPYILVNGKESSIYAFILD-VCNAFINPPP 448
I CA GDRG +L+ ++ + + +VP++ VNGK +L VC + P
Sbjct: 175 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLTLVCQLYQGKKP 234
Query: 449 H-CVNAFYSVTSV 484
C ++ S+ SV
Sbjct: 235 DVCPSSTSSLRSV 247
>BC021136-1|AAH21136.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 56.8 bits (131), Expect = 6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCM 194
+ LN+ + PYG A+ +G++EF CQHG EEC NK+ AC +D + ++ +A + CM
Sbjct: 92 EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCM 149
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 278 IKRCAKGDRGDELLKKYGD--ESKKANYLFVPYILVNGKESSIYAFILD-VCNAFINPPP 448
I CA GDRG +L+ ++ + + +VP++ VNGK +L VC + P
Sbjct: 175 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLTLVCQLYQGKKP 234
Query: 449 H-CVNAFYSVTSV 484
C ++ S+ SV
Sbjct: 235 DVCPSSTSSLRSV 247
>AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ41483 fis, clone BRTHA2002808, highly similar
to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
).
Length = 148
Score = 56.8 bits (131), Expect = 6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCM 194
+ LN+ + PYG A+ +G++EF CQHG EEC NK+ AC +D + ++ +A + CM
Sbjct: 2 EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCM 59
>AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon inducible
lysosomal thiol reductase protein.
Length = 261
Score = 56.8 bits (131), Expect = 6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCM 194
+ LN+ + PYG A+ +G++EF CQHG EEC NK+ AC +D + ++ +A + CM
Sbjct: 103 EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCM 160
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 278 IKRCAKGDRGDELLKKYGD--ESKKANYLFVPYILVNGKESSIYAFILD-VCNAFINPPP 448
I CA GDRG +L+ ++ + + +VP++ VNGK +L VC + P
Sbjct: 186 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLTLVCQLYQGKKP 245
Query: 449 H-CVNAFYSVTSV 484
C ++ S+ SV
Sbjct: 246 DVCPSSTSSLRSV 258
>AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein.
Length = 250
Score = 56.8 bits (131), Expect = 6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCM 194
+ LN+ + PYG A+ +G++EF CQHG EEC NK+ AC +D + ++ +A + CM
Sbjct: 92 EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCM 149
Score = 31.5 bits (68), Expect = 2.7
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 278 IKRCAKGDRGDELLKKYGD--ESKKANYLFVPYILVNGKESSIYAFILD-VCNAFINPPP 448
I CA GDRG +L+ ++ + + +VP++ VNGK +L VC + P
Sbjct: 175 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLALVCQLYQGKKP 234
Query: 449 H-CVNAFYSVTSV 484
C ++ S+ SV
Sbjct: 235 DVCPSSTSSLRSV 247
>J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducible
protein precursor protein.
Length = 303
Score = 49.2 bits (112), Expect = 1e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 18 QYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAID 149
+ LN+ PYG A+ +G++EF CQ G EEC NK+ AC +D
Sbjct: 103 EILNVTSVPYGNAQEQNVSGRWEFKCQLGEEECKFNKVEACVLD 146
>BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 10 protein.
Length = 1059
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 287 CAKGDRGD-ELLKKYGDESKKANYLFVPYILVNGKESSIYA 406
C+ D G+ ELL +YG E++KA +L +P L+ GK S +A
Sbjct: 756 CSAPDTGNMELLVRYGTEAQKARWL-IP--LLEGKARSCFA 793
>AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.
Length = 1059
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 287 CAKGDRGD-ELLKKYGDESKKANYLFVPYILVNGKESSIYA 406
C+ D G+ ELL +YG E++KA +L +P L+ GK S +A
Sbjct: 756 CSAPDTGNMELLVRYGTEAQKARWL-IP--LLEGKARSCFA 793
>AK097425-1|BAC05046.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ40106 fis, clone TESTI2006667, moderately
similar to Probable acyl-CoA dehydrogenase. ).
Length = 492
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 287 CAKGDRGD-ELLKKYGDESKKANYLFVPYILVNGKESSIYA 406
C+ D G+ ELL +YG E++KA +L +P L+ GK S +A
Sbjct: 358 CSAPDTGNMELLVRYGTEAQKARWL-IP--LLEGKARSCFA 395
>AK092356-1|BAC03869.1| 890|Homo sapiens protein ( Homo sapiens
cDNA FLJ35037 fis, clone OCBBF2016729, moderately
similar to Probable acyl-CoA dehydrogenase - Deinococcus
radiodurans. ).
Length = 890
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 287 CAKGDRGD-ELLKKYGDESKKANYLFVPYILVNGKESSIYA 406
C+ D G+ ELL +YG E++KA +L +P L+ GK S +A
Sbjct: 756 CSAPDTGNMELLVRYGTEAQKARWL-IP--LLEGKARSCFA 793
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,609,585
Number of Sequences: 237096
Number of extensions: 1676526
Number of successful extensions: 2787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2787
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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