Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1047
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical pr...    55   5e-08
L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical pr...    55   5e-08
Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical p...    39   0.004
AF077534-7|AAK71376.1|  319|Caenorhabditis elegans Prion-like-(q...    38   0.006
Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical pr...    36   0.019
Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ...    29   3.8  
U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical p...    27   8.8  
AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical ...    27   8.8  

>L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical
           protein C02D5.2b protein.
          Length = 263

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +3

Query: 9   RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIG 158
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C ID  G
Sbjct: 109 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFG 157



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 242 CVW*QFDIDSSPIKRCAKGDRGDELLKKYGDESKKANYL--FVPYILVNGKESS--IYAF 409
           CV   +  +   ++ CA G RG  LL   G ++        F+P+I++NG  +S  +Y  
Sbjct: 181 CVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSDALYDL 240

Query: 410 ILDVCNAFINPPPHC 454
             +VC A    P  C
Sbjct: 241 TQNVCEAMQPMPSAC 255


>L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical
           protein C02D5.2a protein.
          Length = 323

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +3

Query: 9   RLNQYLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVIG 158
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C ID  G
Sbjct: 169 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFG 217



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 242 CVW*QFDIDSSPIKRCAKGDRGDELLKKYGDESKKANYL--FVPYILVNGKESS--IYAF 409
           CV   +  +   ++ CA G RG  LL   G ++        F+P+I++NG  +S  +Y  
Sbjct: 241 CVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSDALYDL 300

Query: 410 ILDVCNAFINPPPHC 454
             +VC A    P  C
Sbjct: 301 TQNVCEAMQPMPSAC 315


>Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical
           protein F37H8.5 protein.
          Length = 277

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +3

Query: 21  YLNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAID 149
           Y+NI + P+G AK +E +G  +  CQHG EEC  NK   C ID
Sbjct: 108 YVNIELVPFGNAKVLE-DGTIK--CQHGEEECSINKFEGCFID 147


>Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical
           protein ZK669.2 protein.
          Length = 264

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  LNINIYPYGKAKTIEK-NGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMD 200
           +NI  +P+G A             CQHGP EC  N L AC I  +    + +   +CM  
Sbjct: 108 INITYHPFGLASCRRSAETGIRCNCQHGPAECQLNMLQACVISTLQVPQLYLPIVNCMQG 167

Query: 201 LNQKNHGSDD 230
            N+ +   DD
Sbjct: 168 KNKFSSAVDD 177



 Score = 35.5 bits (78), Expect = 0.033
 Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +2

Query: 260 DIDSSPIKRCAKGDRGDELLKKYGDESKK-ANYL-FVPYILVNGKES 394
           D+D + + RCA+   G +L+ ++G   K+ A+ L +VP+IL+NG+ S
Sbjct: 187 DLDENFMARCAQSQLGAKLMMQHGYRQKEVASELDWVPWILINGRRS 233


>Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical
           protein R07E5.4 protein.
          Length = 186

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 24  LNINIYPYGKAK-TIEKNGKYEFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMD 200
           +N+ I P+GK   T + N  +   C HG  EC  N+L  CAI       + ++  +C+  
Sbjct: 51  MNLQIVPFGKGDCTYDYNRNFHCTCMHGATECDLNRLQNCAISYFPRRHLGLV--TCLQG 108

Query: 201 LNQKNHG 221
           L     G
Sbjct: 109 LTTLREG 115


>AF077534-7|AAK71376.1|  319|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 48
           protein.
          Length = 319

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 24  LNINIYPYGKAKTIEKNGKYEFICQHGPEECYGNKLHACAIDVI 155
           L + + P+G ++ I ++G   F C HG +EC  N+L +C ID++
Sbjct: 173 LILELVPWGNSR-IMRDGS--FSCNHGQKECDANRLQSCVIDIL 213


>Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical
           protein ZK669.3 protein.
          Length = 218

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 24  LNINIYPYG-KAKTIEKNGKYEFICQ--HGPEECYGNKLHACAIDVIGN 161
           +N + +PYG K   ++     + +C   HG  EC  N+L AC I+ + N
Sbjct: 65  INFDYHPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPN 113


>Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical
           protein T12D8.4 protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +3

Query: 282 NVAQKVTEVTNFSRNTAMRAKKQTTYLSRTF 374
           +V+ KV  +++ +R TA+R  +QTTY ++TF
Sbjct: 201 DVSFKVINLSSKTRTTALRFVQQTTYKAKTF 231


>Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical
           protein F37D6.2c protein.
          Length = 584

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +3

Query: 84  EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 233
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 170 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 217


>Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical
           protein F37D6.2b protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +3

Query: 84  EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 233
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 169 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 216


>Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical
           protein F37D6.2a protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +3

Query: 84  EFICQHGPEECYGNKLHACAIDVIGNITIAVMYNSCMMDLNQKNHGSDDL 233
           +F+C + P +CY  KL    ++VI +I   V+++  +  + +K    D +
Sbjct: 170 KFMCSYNPTKCY--KLCGSVVEVINHIWAHVIHDPPLPPIEKKESKDDGM 217


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 107 RRVLREQITRV-CHRRHWKHNYRSNVQLLHDGLEPEEP 217
           R  L+  I R  CH+ H +HNY S  Q  HD  E  +P
Sbjct: 756 RSALQNFIRREDCHQMHLEHNYSSLYQ-THDSDEENQP 792


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 15  NQYLNINIYPYGKAKTIEKNGKY 83
           NQY+N+ +Y +GK    EK  +Y
Sbjct: 793 NQYINLYLYYFGKTSDYEKRWRY 815


>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
            protein Y37B11A.2 protein.
          Length = 1133

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 362  VPYILVNG-KESSIYAFILDVCNAFINPPPHCVNAFYSVTSV*LVPKKRV 508
            VPY++++G   S++Y+ +  + + F   P + +N FY + +  L   +RV
Sbjct: 975  VPYVIIDGVTGSTVYSCVRSI-DQFARNPEYKINTFYYLNAHILAALRRV 1023


>U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical
           protein F43C9.1 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 140 CHRRHWKHNYRSNVQLLHDGLEPEEPRLR*SSC*CVW*QFDI 265
           C RRH  HNY       H     +    + +S  C+W  FD+
Sbjct: 261 CERRHLTHNYMEFQSRTHTNSHVKISFSQDASTCCIWPVFDV 302


>AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical
           protein Y18D10A.2 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 72  NGKYEFICQHGPEECYGNKLHACA 143
           +GKY   C HG  EC  NKL  C+
Sbjct: 88  DGKYVNRCLHGALECALNKLQMCS 111


>Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical
           protein F14H3.10 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 27  NINIYPYGKAKTIEKNGKYEFI 92
           N ++YPY  AK  + +GK EF+
Sbjct: 476 NEDVYPYSSAKLPDVSGKLEFV 497


>AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical
           protein F54D12.7 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +2

Query: 257 FDIDSSPIKRCAKGDRGDELLKKYGDESKKANY----LFVPYILVNGKESSIYAFIL-DV 421
           F I +SP K CA  DR +++L    +E  K N     + V  I      S  Y +   D 
Sbjct: 92  FKILNSPAK-CA--DRAEDMLLGITNEYNKNNIESYEIQVSEIAGISYYSINYEYTFTDG 148

Query: 422 CNAFINPPPHCVNAFYSVTSV*LVP 496
           CN ++NP P C N   ++ S   +P
Sbjct: 149 CNNWLNPTPTCQNCNKTMFSFSALP 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,653
Number of Sequences: 27780
Number of extensions: 287321
Number of successful extensions: 838
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)