Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1043
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         81   5e-17
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.070
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     28   0.28 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.65 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.65 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   8.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.0  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 80.6 bits (190), Expect = 5e-17
 Identities = 42/96 (43%), Positives = 50/96 (52%)
 Frame = -3

Query: 509 LPSHGCAYVPWGGIEHGKPQYQILVGGPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGRV 330
           +P    AYV +GG E      ++LV     W   S   VP GA  GG T DGE LY+GR 
Sbjct: 47  IPDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGRA 106

Query: 329 RHEGSLTTGKVQQSHGVCYISFGGQSLDSRTTKSSC 222
            HEGS T GKVQ SH   YI +GG  +   T +  C
Sbjct: 107 YHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEVLC 142



 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 419 WVPTSGSN-VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYISFGGQ 255
           W+PTS     PP   PGG   DG  +++GR  H G L   KV       Y+++GGQ
Sbjct: 5   WIPTSVHGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQ 60



 Score = 27.5 bits (58), Expect = 0.49
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 568 GEPLYVARAVHEGATIPGKL 509
           GE LYV RA HEG+   GK+
Sbjct: 98  GEILYVGRAYHEGSQTIGKV 117



 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 577 DCSGEPLYVARAVHEGATIPGKL 509
           D  G  ++V RA H G  +P K+
Sbjct: 24  DSDGAQIFVGRAHHAGDLLPAKV 46


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 30.3 bits (65), Expect = 0.070
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 455 PQYQILVGGPNNWVPTSGSN--VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHG 282
           P    L+GGPN+ +P   S   VPP   P  + +   PL I  V H G   +G +  S  
Sbjct: 101 PHSNHLLGGPNHHLPPGASPGLVPP---PQQQQQQQAPLGIPSVAHGGG--SGAIHASPN 155

Query: 281 VCYISFGGQS 252
               S GG+S
Sbjct: 156 AQNPSSGGRS 165


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 319 PSWRTRPMYKGSPSSVSPPGNAPGGTLDPLVGTQLFGPPT 438
           P W  RP + G P  + PP + P  +     GT +  P T
Sbjct: 94  PPWHPRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTT 133


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 459 SMFNTTPWNVSATMRRKSLPGIVAPS*TARATYRGSPEQSC 581
           S F    ++ SAT   +  P + AP   ARA   G P + C
Sbjct: 124 SPFRHLDFSTSATAELRRNPSLSAPDECARACREGEPPRIC 164


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 459 SMFNTTPWNVSATMRRKSLPGIVAPS*TARATYRGSPEQSC 581
           S F    ++ SAT   +  P + AP   ARA   G P + C
Sbjct: 124 SPFRHLDFSTSATAELRRNPSLSAPDECARACREGEPPRIC 164


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 126  DNTCFIPALLICSKKKQMVDYFHDYSS 46
            D+T F+ A L C+K K  V +   Y S
Sbjct: 976  DSTRFVTANLPCNKHKTRVPHILPYES 1002


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 322 SWRTRPMYKGSPSSVSPPGNAPGGTLDPLVG 414
           SW TR     +     PP  AP G +  ++G
Sbjct: 717 SWGTRENPVDAAKKAPPPVAAPAGKMQKILG 747


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,196
Number of Sequences: 2352
Number of extensions: 18117
Number of successful extensions: 123
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)