Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1043
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094981-1|BAC04468.1|  168|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AY724956-1|AAU21152.1|  307|Homo sapiens taste receptor T2R41 pr...    31   4.6  
AF494232-1|AAM19323.1|  307|Homo sapiens candidate taste recepto...    31   4.6  

>AK094981-1|BAC04468.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37662 fis, clone BRHIP2011080. ).
          Length = 168

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
 Frame = -3

Query: 419 WVPTSGSNVPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYISFGGQSLDSR 240
           WVP S        F GG+      L +  +R EGS   G  Q    +C ISF   S  +R
Sbjct: 42  WVPISHI-----LFCGGDLRRLACLGLSNIR-EGSTRPGCQQ----IC-ISFRPFSPKAR 90

Query: 239 TTKSSC-PNYYHSAESGTAYIRLHQKYTK*LFISNDVFMIIHV---SYRLS*FAAKKSRW 72
            T+SSC  N  +S   GT  + LH+ +   L +S+ + +++H    ++ ++ F A    W
Sbjct: 91  FTRSSCCKNEGNSGTPGTRTVELHRHHLS-LCMSDSLCLVLHTWQGTWLMAAFGATSYYW 149


>AY724956-1|AAU21152.1|  307|Homo sapiens taste receptor T2R41
           protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 558 CMWL-VLFTKVPRSLVNSSFSWLRLRSMGW 472
           C WL VLF     ++ +S+F WL+ R +GW
Sbjct: 100 CSWLSVLFCVKIANITHSTFLWLKWRFLGW 129


>AF494232-1|AAM19323.1|  307|Homo sapiens candidate taste receptor
           TAS2R41 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 558 CMWL-VLFTKVPRSLVNSSFSWLRLRSMGW 472
           C WL VLF     ++ +S+F WL+ R +GW
Sbjct: 100 CSWLSVLFCVKIANITHSTFLWLKWRFLGW 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,357,918
Number of Sequences: 237096
Number of extensions: 2945520
Number of successful extensions: 14713
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14702
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)