Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1034
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.3  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 226 PPPPVLCMHYA 258
           PPPPV   HYA
Sbjct: 164 PPPPVYTHHYA 174


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 485  KSSKDPRAEFKMVFGPSNIYWLLVALSEHSSSQEVNFASTWMVFG 619
            +S  DP++EFK+V   +N  W    + ++  S       T +V+G
Sbjct: 1814 QSLVDPKSEFKVVCYFTNWAWYRQGVGKYLPSDIDPDLCTHIVYG 1858


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 404 VGYLAVYRITFATCLFFLLMALIMIGVKS 490
           VG  + Y +TF     FL++ L + G+ S
Sbjct: 280 VGNASGYTVTFLCLYLFLIITLTIYGLLS 308


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 168 NTPAVLQNKGPTLHPFLVFNSHF 100
           N P +  + GP  HP+ V ++ +
Sbjct: 113 NVPPLTPSPGPPSHPYTVISNGY 135


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/61 (18%), Positives = 30/61 (49%)
 Frame = +2

Query: 377 NFKVDCDEAVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAEFKMVFGPSNIYWLLV 556
           N K+D +    ++    +     +++ ++  +++GV   K+   E+  ++    +Y+LL 
Sbjct: 92  NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLF 151

Query: 557 A 559
           A
Sbjct: 152 A 152


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/61 (18%), Positives = 30/61 (49%)
 Frame = +2

Query: 377 NFKVDCDEAVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAEFKMVFGPSNIYWLLV 556
           N K+D +    ++    +     +++ ++  +++GV   K+   E+  ++    +Y+LL 
Sbjct: 92  NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLF 151

Query: 557 A 559
           A
Sbjct: 152 A 152


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/61 (18%), Positives = 30/61 (49%)
 Frame = +2

Query: 377 NFKVDCDEAVGYLAVYRITFATCLFFLLMALIMIGVKSSKDPRAEFKMVFGPSNIYWLLV 556
           N K+D +    ++    +     +++ ++  +++GV   K+   E+  ++    +Y+LL 
Sbjct: 412 NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLF 471

Query: 557 A 559
           A
Sbjct: 472 A 472


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 126 PFLVFNSHFVLIVLSVLCTTIYIPSNKYVYFDII 25
           PF++F  HF+L         I +    Y Y+  I
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 413 LAVYRITFATCLFFLLMAL 469
           L+  R+   TCL FLL+AL
Sbjct: 59  LSPMRLIVQTCLDFLLLAL 77


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 585 SWDEECSDNATNNQ 544
           SW+  CS N+T++Q
Sbjct: 178 SWNNPCSINSTSSQ 191


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 454 KEETCCKCNSINSQISNRF 398
           KEE   KC    SQ+SN F
Sbjct: 263 KEELARKCGITVSQVSNWF 281


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 575  SSQEVNFASTWMVFGMIGGFCYIVIQLILIIDF 673
            S+QEV+ +  ++    IG        LIL+I F
Sbjct: 1310 STQEVHISKEYLQLEPIGLVFVFFFALILVIQF 1342


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 575  SSQEVNFASTWMVFGMIGGFCYIVIQLILIIDF 673
            S+QEV+ +  ++    IG        LIL+I F
Sbjct: 1310 STQEVHISKEYLQLEPIGLVFVFFFALILVIQF 1342


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = +2

Query: 566 EHSSSQEVNFASTWMVFGMIGGFCYIVIQLI 658
           EH   ++ ++  T+M + ++ G C     L+
Sbjct: 180 EHFFKKQFHYIFTYMPYNIVFGLCLTTFGLL 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,581
Number of Sequences: 336
Number of extensions: 3978
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)