Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1034
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical ...    94   1e-19
Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical pr...    81   1e-15
AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical ...    40   0.001
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    30   1.8  
AC006720-3|AAF60447.1|  159|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL132841-2|CAB60332.1|  469|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z67755-4|CAA91757.1|  336|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z29117-13|CAA82377.2|  435|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     27   9.8  

>AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1a protein.
          Length = 459

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
 Frame = +2

Query: 254 MLVLVTIVCCITLAPGLHNELQKLP-FCTNATDSTVTGLLPGNFKVDCDEAVGYLAVYRI 430
           +L   T + CI L PG+ N+L +   FC    +            + C  A G+ AVYR+
Sbjct: 46  LLFTSTFLSCIMLLPGIQNKLAENKWFCEGLNEYA---------GISCAHATGFQAVYRV 96

Query: 431 TFATCLFFLLMALIMIGVKSSKDPRAEFKMVFGPSNIYWLLVALSEHSSSQEVNFASTWM 610
             AT  F+LL  LIMIGVK SKD R+  +  F       L   +      +  + A+  M
Sbjct: 97  CAATASFYLLFMLIMIGVKDSKDGRSSIQNGFWFFKYLILGALIVGFFFIRSESLATPLM 156

Query: 611 VFGMIGGFCYIVIQLILIIDFAHSWAEIW 697
             G+IGGF +I+IQLILI+DFAH  AE W
Sbjct: 157 YIGLIGGFMFILIQLILIVDFAHGLAEAW 185


>Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical
           protein R11H6.2 protein.
          Length = 442

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 48/146 (32%), Positives = 71/146 (48%)
 Frame = +2

Query: 254 MLVLVTIVCCITLAPGLHNELQKLPFCTNATDSTVTGLLPGNFKVDCDEAVGYLAVYRIT 433
           ML+  T +  + L PG+  +L +  +  +  +            V+C+ A+GY AVYR+ 
Sbjct: 46  MLISATFMAVVMLLPGVQKKLVENKWLCDGLNEYAG--------VNCEHAIGYQAVYRVC 97

Query: 434 FATCLFFLLMALIMIGVKSSKDPRAEFKMVFGPSNIYWLLVALSEHSSSQEVNFASTWMV 613
                FF L  L+M GV SSKD R+  +  F       +   +           A+  M 
Sbjct: 98  AGAASFFFLFMLLMFGVSSSKDGRSSIQNGFWFFKYLLMFGIIGGFFFIGSETLATPLMY 157

Query: 614 FGMIGGFCYIVIQLILIIDFAHSWAE 691
            GM+G F +I+IQLILI+DFAH  AE
Sbjct: 158 IGMLGAFLFILIQLILIVDFAHGLAE 183


>AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1b protein.
          Length = 389

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 254 MLVLVTIVCCITLAPGLHNELQKLP-FCTNATDSTVTGLLPGNFKVDCDEAVGYLAVYRI 430
           +L   T + CI L PG+ N+L +   FC    +            + C  A G+ AVYR+
Sbjct: 46  LLFTSTFLSCIMLLPGIQNKLAENKWFCEGLNEYA---------GISCAHATGFQAVYRV 96

Query: 431 TFATCLFFLLMALIM 475
             AT  F+LL  LI+
Sbjct: 97  CAATASFYLLFILIV 111



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 545 WLLVALSEHSSSQEVNFASTWMVFGMIGGFCYIVIQLILIIDFAHSWAEIW 697
           W    L+E++     +      V+ +        +  ILI+DFAH  AE W
Sbjct: 71  WFCEGLNEYAGISCAHATGFQAVYRVCAATASFYLLFILIVDFAHGLAEAW 121


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 283 TAHNSYQHQHSAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 158
           + H+S+  +H     +  V  V   HA +H EQ  LP   AS
Sbjct: 574 SVHSSHASEHIDEAPQSPVPSVHSSHASEHIEQEALPSPVAS 615


>AC006720-3|AAF60447.1|  159|Caenorhabditis elegans Hypothetical
           protein Y17G9B.6 protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 180 CCHSNTPAVLQNKGPTLHPFLVFNSHF 100
           C HSNTP+++      L PFL   SHF
Sbjct: 84  CYHSNTPSLVSLFFSHLQPFLAIFSHF 110


>Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 470 IMIGVKSSKDPRAEFKMVFGPSNIYWLLVALSEHSSSQEVNFASTWM--VFGMIGGFCYI 643
           +MI VK +      F++    +N   +L    +H    + NF  T M  VF +IGG  +I
Sbjct: 287 VMIKVKGNHCAEV-FQLFKDQNNSCTVLTNTEKHGMIHDNNFIDTAMAYVFTLIGGSKHI 345

Query: 644 VIQLIL 661
           V QLI+
Sbjct: 346 VDQLII 351


>Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 470 IMIGVKSSKDPRAEFKMVFGPSNIYWLLVALSEHSSSQEVNFASTWM--VFGMIGGFCYI 643
           +MI VK +      F++    +N   +L    +H    + NF  T M  VF +IGG  +I
Sbjct: 287 VMIKVKGNHCAEV-FQLFKDQNNSCTVLTNTEKHGMIHDNNFIDTAMAYVFTLIGGSKHI 345

Query: 644 VIQLIL 661
           V QLI+
Sbjct: 346 VDQLII 351


>AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical
           protein Y59E1A.1 protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -2

Query: 211 GHAEQHSEQAVLPQQHASCAAEQRPNTAPISSF*LSLCVDCVVCFMYY 68
           G+  +++ +A +PQ  A C A+++ +    SS  +     C+ CF YY
Sbjct: 419 GYITENTSKASMPQSVAGCLAKEKDD----SSTPMCALFFCLFCFTYY 462


>AL132841-2|CAB60332.1|  469|Caenorhabditis elegans Hypothetical
           protein Y15E3A.4 protein.
          Length = 469

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 153 LQNKGPTLHPFLVFNSHFVLIVLSVLCTTIYIPSNKYVYFDII 25
           ++ KG TL PFL     ++++ +  LC      +   + F +I
Sbjct: 1   MKEKGSTLVPFLADRQRYIILAIGTLCIAAIASNMTVINFTMI 43


>Z67755-4|CAA91757.1|  336|Caenorhabditis elegans Hypothetical
           protein F54F7.4 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
 Frame = +2

Query: 167 LLWQHCLFTMLFSMS-ILHQFHLLPSY----------VCTMLVLVTIVCCITLAPGLHNE 313
           ++W+  +FT  +SM+ ILH      SY          V  M V + +VCC  L   LHNE
Sbjct: 24  IVWK-TVFTEFYSMTHILHLCQCCVSYLVILVASILFVFKMQVWILLVCCFNLIYALHNE 82


>Z29117-13|CAA82377.2|  435|Caenorhabditis elegans Hypothetical
           protein C48B4.2 protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -2

Query: 529 PKNHFEFSSWI--FRRFDTNHN 470
           P N  E SSWI  FR FDT+H+
Sbjct: 10  PVNDIEASSWIRIFRAFDTDHD 31


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 219 CKMDMLNNIVNKQCCHSNTPAVLQNKGPTLHPFLVFNSH 103
           C+M++ N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 219 CKMDMLNNIVNKQCCHSNTPAVLQNKGPTLHPFLVFNSH 103
           C+M++ N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 219 CKMDMLNNIVNKQCCHSNTPAVLQNKGPTLHPFLVFNSH 103
           C+M++ N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 219 CKMDMLNNIVNKQCCHSNTPAVLQNKGPTLHPFLVFNSH 103
           C+M++ N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 219 CKMDMLNNIVNKQCCHSNTPAVLQNKGPTLHPFLVFNSH 103
           C+M++ N  +++      +PA  Q     L P  +F +H
Sbjct: 597 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 635


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,273
Number of Sequences: 27780
Number of extensions: 357431
Number of successful extensions: 1088
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)