Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1026
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   1.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   7.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   9.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +3

Query: 195 LIILFFY*HISSVNL**YIFLISNIIL 275
           +++  F+ H+S V     ++L+ N++L
Sbjct: 272 IVMYVFFFHLSDVRYVMVVYLLKNVVL 298


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 304 ILNLTWNYYH*FKKWTVFVILF 369
           ILN T N+Y+    W +  ++F
Sbjct: 206 ILNQTVNFYNSAFGWPIAFLIF 227


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 RKLFYIILNLTWN 324
           R  +Y++ NLT+N
Sbjct: 37  RSWYYLLTNLTYN 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,214
Number of Sequences: 336
Number of extensions: 857
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)