BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1006
(575 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E940 Cluster: CG4878-PA, isoform A; n=4; Diptera|Rep:... 93 6e-18
UniRef50_P55884 Cluster: Eukaryotic translation initiation facto... 75 9e-13
UniRef50_Q5DAH4 Cluster: SJCHGC06664 protein; n=1; Schistosoma j... 64 2e-09
UniRef50_Q6C1H8 Cluster: Similar to DEHA0F10681g Debaryomyces ha... 53 6e-06
UniRef50_P06103 Cluster: Eukaryotic translation initiation facto... 52 1e-05
UniRef50_Q9XWI6 Cluster: Putative uncharacterized protein eif-3.... 48 2e-04
UniRef50_Q0UY05 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q10425 Cluster: Probable eukaryotic translation initiat... 46 5e-04
UniRef50_Q5CPL7 Cluster: Prtip-like IF39 eukaryotic translation ... 45 0.001
UniRef50_Q5Y250 Cluster: PRT1p; n=8; Tremellomycetes|Rep: PRT1p ... 44 0.003
UniRef50_Q54QW1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_A1CS92 Cluster: Eukaryotic translation initiation facto... 40 0.032
UniRef50_Q4Z2E8 Cluster: Putative uncharacterized protein; n=4; ... 38 0.22
UniRef50_Q7RNH3 Cluster: Maebl; n=2; cellular organisms|Rep: Mae... 35 1.2
UniRef50_Q552E4 Cluster: Actin binding protein; n=2; Dictyosteli... 34 2.1
UniRef50_Q9C5Z1 Cluster: Eukaryotic translation initiation facto... 34 2.8
UniRef50_A6EFA2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_A4S7N8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 3.6
UniRef50_Q8SU74 Cluster: Putative uncharacterized protein ECU11_... 33 4.8
UniRef50_Q6FQD1 Cluster: Similar to tr|Q12242 Saccharomyces cere... 33 4.8
UniRef50_Q4P6G4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_UPI00015B46FE Cluster: PREDICTED: similar to ENSANGP000... 33 6.4
UniRef50_UPI00006CB1F4 Cluster: hypothetical protein TTHERM_0030... 33 6.4
UniRef50_UPI00006CB055 Cluster: hypothetical protein TTHERM_0023... 33 6.4
>UniRef50_Q0E940 Cluster: CG4878-PA, isoform A; n=4; Diptera|Rep:
CG4878-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 690
Score = 92.7 bits (220), Expect = 6e-18
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRPRPPTLLS YY+ FE KDR+R ++ASKEL+ KR++ + F EY
Sbjct: 582 QFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEY 641
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R +I EW EQK RR+ LR +VD
Sbjct: 642 RNKRIAEWAEQKSRRIMLRGHVD 664
>UniRef50_P55884 Cluster: Eukaryotic translation initiation factor 3
subunit 9; n=31; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 9 - Homo sapiens (Human)
Length = 814
Score = 75.4 bits (177), Expect = 9e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 701 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 760
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 761 RKMAQELYMEQKNERLELRGGVD 783
>UniRef50_Q5DAH4 Cluster: SJCHGC06664 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06664 protein - Schistosoma
japonicum (Blood fluke)
Length = 121
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +2
Query: 8 FHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 187
F WRPRPPTLLS Y SQ ++DRM +SKAS+EL KR + + +F ++
Sbjct: 9 FTWRPRPPTLLSAEQLQTIKRNMPKYNSQLANEDRMLASKASRELFEKRQKLLAEFNAWK 68
Query: 188 ESKIQEWNEQKPRRLELR 241
+ I+ +N+ + R LR
Sbjct: 69 SNLIKLYNQDEEERFRLR 86
>UniRef50_Q6C1H8 Cluster: Similar to DEHA0F10681g Debaryomyces
hansenii IPF 8292.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0F10681g Debaryomyces hansenii IPF 8292.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 717
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 8 FHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 187
F WRPRPPTLLS Y +FE D M +S+AS+EL+ R ++++T +R
Sbjct: 617 FSWRPRPPTLLSKQQKKDIRNNLEEYSRKFEEIDAMEASEASRELIMLRKRLLEEWTAWR 676
Query: 188 ---ESKIQEWNEQKPRRLE 235
+ K++E +P E
Sbjct: 677 AQTDKKLEELGLVEPEPAE 695
>UniRef50_P06103 Cluster: Eukaryotic translation initiation factor 3
90 kDa subunit; n=6; Saccharomycetales|Rep: Eukaryotic
translation initiation factor 3 90 kDa subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 763
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 8 FHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 187
F WRPRP ++LS + +QFE +D M + A ++L+ + E +K++TEYR
Sbjct: 658 FAWRPRPASILSNAERKKVRKNLREWSAQFEEQDAMEADTAMRDLILHQRELLKQWTEYR 717
Query: 188 ESKIQE 205
E QE
Sbjct: 718 EKIGQE 723
>UniRef50_Q9XWI6 Cluster: Putative uncharacterized protein eif-3.B;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein eif-3.B - Caenorhabditis elegans
Length = 725
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 2 AQFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTE 181
AQF WRPRPP LS ++F +D +AS+E+V KR + M F
Sbjct: 607 AQFKWRPRPPVKLSEQKQREIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKIMAAFDI 666
Query: 182 YRESKIQEWNEQKPRRLELRDYVD 253
R ++ + + R+ LR+ VD
Sbjct: 667 IRSRNREQLDATRDERISLRNGVD 690
>UniRef50_Q0UY05 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 591
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y F+ D + S A++ +V R E ++++ ++
Sbjct: 481 QLLWRPRPPTLLSKEEQAEIRKNLRNYSKVFDEHDLAKRSSANRAVVEARREMLQEWKQW 540
Query: 185 RESKIQEWNEQ 217
RE + E+
Sbjct: 541 REDVLHRLQEE 551
>UniRef50_Q10425 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 9; n=1; Schizosaccharomyces pombe|Rep:
Probable eukaryotic translation initiation factor 3
subunit 9 - Schizosaccharomyces pombe (Fission yeast)
Length = 725
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRPRPP+ L+ Y F+ +D S A++EL A+R + + ++ +Y
Sbjct: 619 QFIWRPRPPSPLTKEDMKKIRKKLKDYNRLFDEEDIAEQSSANRELAARRRQLISEWQKY 678
Query: 185 RESKIQEWNEQK 220
R+ I E++
Sbjct: 679 RDEVIARVAEER 690
>UniRef50_Q5CPL7 Cluster: Prtip-like IF39 eukaryotic translation
initiation factor 3; n=2; Cryptosporidium|Rep:
Prtip-like IF39 eukaryotic translation initiation factor
3 - Cryptosporidium parvum Iowa II
Length = 724
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRP PP+LLS Y +F+++D S+ ++ KR +F
Sbjct: 613 QFIWRPHPPSLLSQEKFDEIPRKLKDYSKKFDAEDEAVRSEKRNIVLQKRKVNEDEFNAI 672
Query: 185 RESKIQEWNEQKP 223
+ KIQEW Q+P
Sbjct: 673 LQ-KIQEWKVQQP 684
>UniRef50_Q5Y250 Cluster: PRT1p; n=8; Tremellomycetes|Rep: PRT1p -
Cryptococcus gattii (Filobasidiella gattii)
(Cryptococcusbacillisporus)
Length = 753
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRPRPPTLLS + QF+ +D ++ S E +A+R ++ ++ +
Sbjct: 647 QFLWRPRPPTLLSKDQIKKVRRELRDHSRQFDEEDAAEENRGSAEKLAQRRREIGEWNAW 706
Query: 185 R 187
R
Sbjct: 707 R 707
>UniRef50_Q54QW1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 660
Score = 43.2 bits (97), Expect = 0.005
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQ-MKKFTE 181
QF+WRPRP +L+ Y +F+ +D +KA + + R + MK+F
Sbjct: 550 QFNWRPRPKFMLTNKEINQIKQNIKKYQEKFDKQDE-DDNKAIQHIEQTRLDNLMKEFLS 608
Query: 182 YRESKIQEWNEQKPRRLELRDYVD 253
+ + QE+ +P R +L Y D
Sbjct: 609 FLQKGEQEYQALEPTRKQLGSYED 632
>UniRef50_A1CS92 Cluster: Eukaryotic translation initiation factor 3
subunit EifCb, putative; n=15; Pezizomycotina|Rep:
Eukaryotic translation initiation factor 3 subunit
EifCb, putative - Aspergillus clavatus
Length = 741
Score = 40.3 bits (90), Expect = 0.032
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRPRPPT LS Y +F+ +DR A+ +V KR + ++ +
Sbjct: 624 QFLWRPRPPTFLSKEEQKQVRKNLREYSKEFDEEDRYAVDIANTAVVEKRKRVLSEWIAW 683
Query: 185 RESKIQEWNEQK 220
+ + +E K
Sbjct: 684 IRREKELLSEDK 695
>UniRef50_Q4Z2E8 Cluster: Putative uncharacterized protein; n=4;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 2294
Score = 37.5 bits (83), Expect = 0.22
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +2
Query: 92 QFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTVLTR 271
+ E + R+ K +E KR E+MK+ E +S++ EW +++ + +L+ Y + L
Sbjct: 1634 RLEEEKRLEEMKRLEE--EKRLEEMKRLEEEEKSRMDEWKKRQNKIEQLKRYEEAKKLKE 1691
Query: 272 MR*IQSKR 295
++ IQS +
Sbjct: 1692 LKMIQSAK 1699
>UniRef50_Q7RNH3 Cluster: Maebl; n=2; cellular organisms|Rep: Maebl -
Plasmodium yoelii yoelii
Length = 2446
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +2
Query: 149 KRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTVLTRMR*IQSKR 295
KR E+MK+ E +S++ EW + + + +L+ Y + L ++ IQS +
Sbjct: 1945 KRVEEMKRLEEENKSRMDEWKKHQNKIEQLKRYEEAKKLKELKMIQSAK 1993
>UniRef50_Q552E4 Cluster: Actin binding protein; n=2; Dictyostelium
discoideum|Rep: Actin binding protein - Dictyostelium
discoideum AX4
Length = 1503
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 QFESKDRMRSSKAS-KELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTVLT 268
+ E ++R R + KE KR E+ ++ + +E KI+++ E+K ++ ELR + +
Sbjct: 575 RIEKEERERKEEEERKEKERKRQEEEERIKKEQEEKIRQFEEEKKKQEELRLIEQERIRV 634
Query: 269 RMR*IQSKRL 298
I+ +RL
Sbjct: 635 EQELIRKERL 644
>UniRef50_Q9C5Z1 Cluster: Eukaryotic translation initiation factor 3
subunit 9; n=18; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 9 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 712
Score = 33.9 bits (74), Expect = 2.8
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPP+ L+ Y ++E++D+ S L + E+ K E
Sbjct: 601 QLAWRPRPPSFLTAEKEEEIAKTLKKYSKKYEAEDQ----DVSLLLSEQDREKRKALKEE 656
Query: 185 RESKIQEW----NEQKPRRLELRD 244
E + +W E+K R LRD
Sbjct: 657 WEKWVMQWKSLHEEEKLVRQNLRD 680
>UniRef50_A6EFA2 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 254
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 134 KELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTVLTRMR*IQSKRL 298
K A +M K +YRE +EW +Q P+ LE D KT L + Q RL
Sbjct: 193 KRKKAALQNKMDKHHDYREKTYREWVDQHPQSLEEHDLERKTRLEKRISEQKHRL 247
>UniRef50_A4S7N8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 713
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
QF WRPR +LL+ Y +FE D ++A + +++ +K+ ++
Sbjct: 604 QFLWRPRAKSLLTAEQEADIEKNIKKYSKRFEEIDEKIRNEADSNVASEKRATAEKWKKW 663
Query: 185 RESK 196
ESK
Sbjct: 664 VESK 667
>UniRef50_Q8SU74 Cluster: Putative uncharacterized protein
ECU11_0390; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU11_0390 - Encephalitozoon
cuniculi
Length = 690
Score = 33.1 bits (72), Expect = 4.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 83 YYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEW 208
YY+ ESK + L++ TE ++K+T+ + K++EW
Sbjct: 324 YYNTIESKFNKIADALGGRLLSNETELLEKYTKTAQEKLKEW 365
>UniRef50_Q6FQD1 Cluster: Similar to tr|Q12242 Saccharomyces
cerevisiae YOR138c; n=1; Candida glabrata|Rep: Similar
to tr|Q12242 Saccharomyces cerevisiae YOR138c - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 603
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 125 KASKELVAKRTEQMKKFTEYRESKIQEWNEQKP 223
K EL AK+TE+M + + E EWN Q P
Sbjct: 439 KLKDELTAKKTEKMNSYKQISEKMHTEWNIQNP 471
>UniRef50_Q4P6G4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 745
Score = 33.1 bits (72), Expect = 4.8
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSS---KASKELVAKRTEQMK 169
Q WRPRP TLL Y QFE +D S A +EL + E+ K
Sbjct: 632 QILWRPRPRTLLGKDEQKRVRKNLREYSKQFEEEDAAEESNLASAERELYQRILEEWK 689
>UniRef50_UPI00015B46FE Cluster: PREDICTED: similar to
ENSANGP00000020801; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000020801 - Nasonia
vitripennis
Length = 587
Score = 32.7 bits (71), Expect = 6.4
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +2
Query: 92 QFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQK 220
Q E+KD + + +++++ + + + K E+R+ ++WNE+K
Sbjct: 268 QMEAKDLKKQLQETEQMLQSQKQDLAKEVEFRKGMEEKWNEKK 310
>UniRef50_UPI00006CB1F4 Cluster: hypothetical protein
TTHERM_00301960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00301960 - Tetrahymena
thermophila SB210
Length = 774
Score = 32.7 bits (71), Expect = 6.4
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Frame = +2
Query: 92 QFESKDRMRSSKASKELVAKRTEQMKKF-TEYRESKIQEWNEQ----KPRRLELRDYVDK 256
Q ES + + K +E +QMK+ EY ES IQE +Q K + +LRD++ +
Sbjct: 635 QAESHQKFKEKKIKEE----ERQQMKQILNEYVESNIQEIKDQAYYKKQLQGQLRDFLTQ 690
Query: 257 TVLTRMR*IQSKRLLNFXXXXXXXXXXXXYTLRTFEVGVKRLRPPREPDNTGFFK 421
+ + IQ K +++ +E + L+ +E +N F K
Sbjct: 691 QIEEKKE-IQQKNFIDYDKIQLKACQKYNDAQNQYENQINELKKQQEIENFQFLK 744
>UniRef50_UPI00006CB055 Cluster: hypothetical protein
TTHERM_00239360; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00239360 - Tetrahymena
thermophila SB210
Length = 1220
Score = 32.7 bits (71), Expect = 6.4
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 89 SQFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEW-NEQKPRRLELRDYVDKTVL 265
+QFE + K K+L + +Q KF E QEW EQ+ + +++ K V
Sbjct: 680 NQFEKEKERLEQKHQKKLEETKQKQKSKFNSKIERMKQEWIEEQEEDKAKVKKECQKVVQ 739
Query: 266 TRMR*IQSKRLLN 304
+ I+ K+L+N
Sbjct: 740 QEI--IEMKQLIN 750
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,033,819
Number of Sequences: 1657284
Number of extensions: 6967776
Number of successful extensions: 18500
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18482
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -