Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1006
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 75 1e-13
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 75 1e-13
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 75 1e-13
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 75 1e-13
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 75 1e-13
AK126670-1|BAC86636.1| 152|Homo sapiens protein ( Homo sapiens ... 44 3e-04
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 30 6.7
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 30 6.7
AF253978-1|AAG44627.1| 579|Homo sapiens BAT2-iso protein. 29 8.9
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 701 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 760
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 761 RKMAQELYMEQKNERLELRGGVD 783
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 701 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 760
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 761 RKMAQELYMEQKNERLELRGGVD 783
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 701 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 760
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 761 RKMAQELYMEQKNERLELRGGVD 783
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 509 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 568
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 569 RKMAQELYMEQKNERLELRGGVD 591
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
Q WRPRPPTLLS Y FE KDR+ SKASKELV +R M+ F +Y
Sbjct: 701 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKY 760
Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
R+ + + EQK RLELR VD
Sbjct: 761 RKMAQELYMEQKNERLELRGGVD 783
>AK126670-1|BAC86636.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ44714 fis, clone BRACE3020669, highly similar
to Eukaryotic translation initiation factor 3 subunit 9.
).
Length = 152
Score = 44.4 bits (100), Expect = 3e-04
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = +2
Query: 5 QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASK 136
Q WRPRPPTLLS Y FE KDR+ SKASK
Sbjct: 98 QLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASK 141
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 104 KDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELR 241
KDR R + KEL ++ +Q + E ++ K +E QK + EL+
Sbjct: 533 KDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQ 578
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated
protein 2 protein.
Length = 2701
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 104 KDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELR 241
KDR R + KEL ++ +Q + E ++ K +E QK + EL+
Sbjct: 533 KDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQ 578
>AF253978-1|AAG44627.1| 579|Homo sapiens BAT2-iso protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 104 KDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLEL 238
KDR R + KEL ++ +Q + E ++ K +E QK + EL
Sbjct: 535 KDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKEL 579
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,537,844
Number of Sequences: 237096
Number of extensions: 999642
Number of successful extensions: 1911
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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