Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1006
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p pro...    93   3e-19
AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB...    93   3e-19
AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA...    93   3e-19
AY061447-1|AAL28995.1| 1159|Drosophila melanogaster LD38375p pro...    29   4.5  
AE014296-2859|AAF49383.1| 1159|Drosophila melanogaster CG7728-PA...    29   4.5  
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P...    29   6.0  

>AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p
           protein.
          Length = 690

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 43/83 (51%), Positives = 54/83 (65%)
 Frame = +2

Query: 5   QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
           QF WRPRPPTLLS             YY+ FE KDR+R ++ASKEL+ KR++  + F EY
Sbjct: 582 QFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEY 641

Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
           R  +I EW EQK RR+ LR +VD
Sbjct: 642 RNKRIAEWAEQKSRRIMLRGHVD 664


>AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB,
           isoform B protein.
          Length = 690

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 43/83 (51%), Positives = 54/83 (65%)
 Frame = +2

Query: 5   QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
           QF WRPRPPTLLS             YY+ FE KDR+R ++ASKEL+ KR++  + F EY
Sbjct: 582 QFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEY 641

Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
           R  +I EW EQK RR+ LR +VD
Sbjct: 642 RNKRIAEWAEQKSRRIMLRGHVD 664


>AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA,
           isoform A protein.
          Length = 690

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 43/83 (51%), Positives = 54/83 (65%)
 Frame = +2

Query: 5   QFHWRPRPPTLLSXXXXXXXXXXXXXYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEY 184
           QF WRPRPPTLLS             YY+ FE KDR+R ++ASKEL+ KR++  + F EY
Sbjct: 582 QFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEY 641

Query: 185 RESKIQEWNEQKPRRLELRDYVD 253
           R  +I EW EQK RR+ LR +VD
Sbjct: 642 RNKRIAEWAEQKSRRIMLRGHVD 664


>AY061447-1|AAL28995.1| 1159|Drosophila melanogaster LD38375p protein.
          Length = 1159

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 149  KRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTV 262
            +R E  K+   YRE K ++   Q+ R+ ELR  V + +
Sbjct: 1113 ERMEMKKRIKNYREKKREKMASQERRQKELRKKVSRAI 1150


>AE014296-2859|AAF49383.1| 1159|Drosophila melanogaster CG7728-PA
            protein.
          Length = 1159

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 149  KRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDKTV 262
            +R E  K+   YRE K ++   Q+ R+ ELR  V + +
Sbjct: 1113 ERMEMKKRIKNYREKKREKMASQERRQKELRKKVSRAI 1150


>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
            protein.
          Length = 1833

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +2

Query: 104  KDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQK 220
            + R+ SSK   ELV++R+    K +E  +SK+ E+ E++
Sbjct: 1339 ESRLESSKIKTELVSERSANEIKISE-MQSKLNEFEEER 1376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,400,628
Number of Sequences: 53049
Number of extensions: 334092
Number of successful extensions: 803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)