Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1006
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.9  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   8.7  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   8.7  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   8.7  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 451 LIISICFCFQPSQTK*FHNVIVMSQFI 531
           +I +IC C      K F N I M Q I
Sbjct: 6   IISAICICVGALSIKDFQNAIRMGQSI 32


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 87  SLSNNYNYNNNYNNYNK 103


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 320 SLSNNYNYNNNYNNYNK 336


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 524 SLSKNINYFDKLRHYNE 574
           SLS N NY +   +YN+
Sbjct: 320 SLSNNYNYNNNYNNYNK 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,545
Number of Sequences: 438
Number of extensions: 2144
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)