Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1002
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4D9W7 Cluster: Putative uncharacterized protein; n=2; ...    40   0.065
UniRef50_A6DDN1 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q4FN83 Cluster: Deoxynucleotidase; n=2; Candidatus Pela...    35   1.9  
UniRef50_A0CF01 Cluster: Chromosome undetermined scaffold_173, w...    33   5.7  
UniRef50_Q8IHV9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_Q4D9W7 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 526

 Score = 39.9 bits (89), Expect = 0.065
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 300 CFSNCICCCNASLITKLFRWLLNYFLCVSSYI 205
           C  +C CCC  SL    +RW +NY+L + +YI
Sbjct: 24  CSCSCCCCCCCSLSWWWWRWFINYYLIIYAYI 55


>UniRef50_A6DDN1 Cluster: Putative uncharacterized protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Putative
           uncharacterized protein - Caminibacter mediatlanticus
           TB-2
          Length = 114

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +2

Query: 248 NNFVIKEALQQQMQFEKQTGVL*IKRFLLIVFCKARHSLAM*NKICHVSTNHVTL-NSSR 424
           N  ++KE LQ +++FEK+       + ++++  K ++   +   IC++S NH+T  N  +
Sbjct: 27  NKNILKENLQNKIEFEKKA------KTIIVLKEKLKNKTYLLKDICNISYNHITCKNLDK 80

Query: 425 NRVSK 439
           N+ SK
Sbjct: 81  NKFSK 85


>UniRef50_Q4FN83 Cluster: Deoxynucleotidase; n=2; Candidatus
           Pelagibacter ubique|Rep: Deoxynucleotidase -
           Pelagibacter ubique
          Length = 484

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +3

Query: 63  YSINSIDKIIHRKYIGPC*YFICDVKNQNGVIENNTWKLIVYVFLNTGYTTTHIKNN*VT 242
           + I+ ++KI++ K        I   KN+N  ++N  W  I+ +F N      +I+NN   
Sbjct: 144 FFIDDLNKILNHKKFSKVTEKIFFGKNKNNNLKNKNWSQIIKLFKNKIKNLNNIENNNKV 203

Query: 243 TETIS*LR---KHYSNKCSSRNRPVYYK 317
            +  + L+   K++ N+ S +N   +Y+
Sbjct: 204 FQIYNKLKIVVKNFGNENSFKNELKFYQ 231


>UniRef50_A0CF01 Cluster: Chromosome undetermined scaffold_173,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_173,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 498

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = -3

Query: 281 VAVMLP*LRNCFGG-YLIIFYVCRRISGVQKNVY-N*FPCIIFNNSILVLDVTDKISTRS 108
           + V  P L  CF     ++  + + IS +Q+++  N   C+  NN++L    T ++   +
Sbjct: 54  IKVSYPLLAYCFNNDEQVVKSILQSISSIQQHIESNKKQCVFDNNALLYYQNTQQLVITN 113

Query: 107 NVFSVNDFVY*IYAI 63
           N+   N++VY  Y++
Sbjct: 114 NIDDQNEWVYNQYSV 128


>UniRef50_Q8IHV9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1824

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +3

Query: 135  VKNQNGVIENNTWKLIVYVFLNTGYTTTHIKNN*VTTETIS*LRKHYSNKCSSRNRPVYY 314
            ++ +N +I NN   ++   + NT  T     NN      I+ L +   NK  S N  V Y
Sbjct: 1649 IEEKNDIIYNNQKNILTCKYSNTFSTKNKQNNNYHKNHFINLLSQTNKNKVLSSNSCVKY 1708

Query: 315  KSNDF 329
            K +DF
Sbjct: 1709 KLSDF 1713


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,326,166
Number of Sequences: 1657284
Number of extensions: 16129291
Number of successful extensions: 33415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33382
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)