Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1002
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.85 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.85 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 591 PLPVPSPDEKRGGLASVCHLPGRKNITPSNGWRSTNP 701
           P P+ SP+  +  +A+  H P    ++P  G+RS  P
Sbjct: 173 PYPILSPEMSQ--VAASWHTPSMYPLSPGAGFRSPYP 207


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 591 PLPVPSPDEKRGGLASVCHLPGRKNITPSNGWRSTNP 701
           P P+ SP+  +  +A+  H P    ++P  G+RS  P
Sbjct: 65  PYPILSPEMSQ--VAASWHTPSMYPLSPGAGFRSPYP 99


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 513 CYVKYTSMVLF*-LVYYAYSAIIIITLPL 596
           C   +T  +LF   +YY YSA II T+ L
Sbjct: 198 CLDYFTLHLLFLPCIYYFYSAFIIFTIHL 226


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 630 LASVCHLPGRKNITPSNGWRSTNP 701
           LAS   L G  N  PSNG  S+ P
Sbjct: 64  LASGSSLNGLTNNVPSNGLSSSGP 87


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 297 FSNCICCCNASLITKLFRWLLNYFLCVSSYI 205
           F N +  CN +    L+RW++ Y L   S +
Sbjct: 149 FLNFMLHCNNTTWRCLYRWIVLYTLSKMSQV 179


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 110 SNVFSVNDFVY 78
           SNVF +N FVY
Sbjct: 611 SNVFRMNQFVY 621


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,194
Number of Sequences: 336
Number of extensions: 4643
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)