Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1002
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.6  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 499 LKRLIDVRMKRQWKQFYG 446
           LKRLI    +R+WK+F G
Sbjct: 318 LKRLIKHTRQRKWKEFLG 335


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 171 WKLIVYVFLNTGYTTT 218
           W +I+ VFLNTG   T
Sbjct: 489 WLIIILVFLNTGVLAT 504


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 237 LNYFLCVSSYIRCSKKRIQLVSMYY 163
           L Y +C+  + R +++  +L +MYY
Sbjct: 495 LGYRVCIEKFFRMNRELHRLQTMYY 519


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 576 IIITLPLPVPSP 611
           III LPLP+P P
Sbjct: 634 IIIPLPLPIPVP 645


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 234 NYFLCVSSYIRCSKKRIQLVSMYYFQ 157
           NYF   +  I  + K I +   YYFQ
Sbjct: 844 NYFFTATFAIEATMKLIAMSPKYYFQ 869


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,059
Number of Sequences: 2352
Number of extensions: 15764
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)