Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0985
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 156 1e-38
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 151 3e-37
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 3e-37
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 147 7e-36
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 134 7e-32
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 109 2e-24
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 70 1e-12
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 70 1e-12
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 67 1e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 66 2e-11
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 62 5e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 4e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 37 0.015
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 36 0.036
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 36 0.036
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 31 1.0
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.0
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 30 1.8
SB_8901| Best HMM Match : UPF0203 (HMM E-Value=3.7) 30 1.8
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 4.1
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 9.4
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 156 bits (379), Expect = 1e-38
Identities = 70/81 (86%), Positives = 74/81 (91%)
Frame = +2
Query: 14 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 193
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 194 NEASXGKYVPRAILVDLEPGT 256
NEA+ GKYVPRA+LVDLEPGT
Sbjct: 265 NEATGGKYVPRAVLVDLEPGT 285
Score = 134 bits (325), Expect = 4e-32
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG
Sbjct: 286 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 345
Query: 436 FQ 441
FQ
Sbjct: 346 FQ 347
Score = 84.2 bits (199), Expect = 8e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 369 REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 409
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 151 bits (367), Expect = 3e-37
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 221 PRAILVDLEPGT 256
PRAILVDLEPGT
Sbjct: 61 PRAILVDLEPGT 72
Score = 134 bits (325), Expect = 4e-32
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 84.2 bits (199), Expect = 8e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 151 bits (367), Expect = 3e-37
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 221 PRAILVDLEPGT 256
PRAILVDLEPGT
Sbjct: 61 PRAILVDLEPGT 72
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF 315
MDSVRSGPFGQIFRPDNFVF
Sbjct: 73 MDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 147 bits (356), Expect = 7e-36
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 221 PRAILVDLEPGT 256
PR++L+DLEPGT
Sbjct: 61 PRSVLIDLEPGT 72
Score = 132 bits (320), Expect = 2e-31
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDC+QG
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESCDCIQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENT 196
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 134 bits (323), Expect = 7e-32
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC+QG
Sbjct: 18 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCIQG 77
Query: 436 FQ 441
FQ
Sbjct: 78 FQ 79
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 495 LQNQREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
L+ + EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 98 LKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 141
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 209 GKYVPRAILVDLEPGT 256
GKYVPRA+LVDLEPGT
Sbjct: 2 GKYVPRAVLVDLEPGT 17
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 109 bits (261), Expect = 2e-24
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEAE+CDC+QG
Sbjct: 29 MDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENCDCMQG 88
Query: 436 FQ 441
Q
Sbjct: 89 VQ 90
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKV 563
+ EYPDRI++ +SVVPSPKV
Sbjct: 112 REEYPDRILSAFSVVPSPKV 131
Score = 35.1 bits (77), Expect = 0.047
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 209 GKYVPRAILVDLEPGT 256
G+YVPR+ILVDLEPGT
Sbjct: 13 GRYVPRSILVDLEPGT 28
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ V + A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 508 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQG 567
Query: 436 F 438
F
Sbjct: 568 F 568
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 215 YVPRAILVDLEP 250
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 495 VPRAVFVDLEP 505
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 593 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHS 631
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+ C LQG
Sbjct: 660 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQG 719
Query: 436 F 438
F
Sbjct: 720 F 720
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 139 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 198
Query: 436 F 438
F
Sbjct: 199 F 199
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 215 YVPRAILVDLEP 250
+VPRA+ VDLEP
Sbjct: 646 HVPRAVFVDLEP 657
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 574 VPRAVFVDLEP 584
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 126 VPRAVFVDLEP 136
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 745 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHS 783
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 224 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 262
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +1
Query: 259 DSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 438
D VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 97 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 135
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E++D+VLD +RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 215 YVPRAILVDLEP 250
+VPRA+ DLEP
Sbjct: 61 HVPRAVFCDLEP 72
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHS 198
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQG 133
Query: 436 F 438
F
Sbjct: 134 F 134
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 61 VPRAVFVDLEP 71
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 159 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHS 197
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 879 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQCTGLQG 938
Query: 436 F 438
F
Sbjct: 939 F 939
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E +D VLD +RK A+ C LQG
Sbjct: 446 IDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGCTGLQG 505
Query: 436 F 438
F
Sbjct: 506 F 506
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 433 VPRAVFVDLEP 443
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 218 VPRAILVDLEP 250
VPRA+ DLEP
Sbjct: 866 VPRAVFADLEP 876
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 964 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 1002
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P +S VVEPYN+ L+ H +E++
Sbjct: 531 DYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHS 569
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + Q+F P+ + + A NN+A+GHYT G + +D+VLD +RK A+ C LQG
Sbjct: 493 IDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQCSGLQG 552
Query: 436 F 438
F
Sbjct: 553 F 553
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G +L++ VLD +RK A+ C LQG
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQG 119
Query: 436 F 438
F
Sbjct: 120 F 120
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 218 VPRAILVDLEP 250
VPRA+ VDLEP
Sbjct: 480 VPRAVFVDLEP 490
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASXGKYVPRAILVDLEP 250
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 578 DYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHS 616
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 145 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 183
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 438
VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 85 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 123
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 215 YVPRAILVDLEP 250
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 198
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASXGK 214
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 215 YVPRAILVDLEP 250
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
Q EYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E T
Sbjct: 37 QEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETT 77
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 397 VRKEAESCDCLQGFQ 441
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 319 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 441
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 620
+ EYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+
Sbjct: 64 REEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVD 102
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 215 YVPRAILVDLEPGTWTLS 268
+VPRA+ VDLEP LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1
Query: 298 PDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 438
P+ + + A NN+A+GHYT G + VD VLD +RK A+ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + ++V P+P ++ VVEPYN+ L+ H +E++
Sbjct: 150 DYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHS 188
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + Q+F P+ + + A NN+A+GHYT G E +D LD +RK A+ C LQG
Sbjct: 40 IDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQG 99
Query: 436 F 438
F
Sbjct: 100 F 100
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + ++V P+P++S VVEPYN+ LS H +E++
Sbjct: 125 DYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHS 163
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 173 ERINVYYNEASXGKYVPRAILVDLEP 250
+ N ++ E GK+VPRA+ VDLEP
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + ++ P+ + + A NN+A+GHYT G E+V+ V+D +RK + C LQG
Sbjct: 986 IDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQG 1045
Query: 436 F 438
F
Sbjct: 1046 F 1046
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 194 NEASXGKYVPRAILVDLEP 250
+EA+ GKYVPRA+LVDLEP
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + ++V P+P +S VVEPYN+ L+ H +E++
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHS 1109
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 438
+R+G + Q+F P+ + + A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + ++V P+P++S VVEPYN+ L+ H +E++
Sbjct: 85 DYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHS 123
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRK 405
VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1
Query: 325 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 438
G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 104 GSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 50 IVHIQAGQCGNQIGAKFWEIISDE 121
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRK 405
VR G + +F PD + + A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASX 208
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 209 GKY 217
GK+
Sbjct: 254 GKH 256
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y R ++V P+P++S VVEPYN+ L+ H +E++
Sbjct: 291 DYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHS 329
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 98 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 199
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +++ P+P++S VVEPYN+ L+ H +E++
Sbjct: 35 DYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHS 73
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623
+YPD T +V PS D + PYN+ L++HQL E+
Sbjct: 172 DYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEH 208
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623
+YPD T +V PS D + PYN+ L++HQL E+
Sbjct: 24 DYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEH 60
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 295 RPDNFVF*QSGAGNNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQG 435
R N + + G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 435 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 256
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 416 DSASFRTTSKTESTSSAPSV*CPLAQL 336
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 411 GIV*LPPGIPTDTLARXRHRFRYGHPPH 494
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_8901| Best HMM Match : UPF0203 (HMM E-Value=3.7)
Length = 602
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 199 SLXRQVRAPRHPRRLGARHMDSVRSGPFGQIFRPDNFV 312
S R+VR PRH R +R++D + + F Q RP F+
Sbjct: 475 SRLREVRVPRHQER--SRYIDGMPNKVFSQALRPTVFL 510
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 552 SPKVSDTVVEPYNATLSVHQLVEN 623
S +SD VV+PYN+ L++ +L +N
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQN 234
>SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 315 EDEVVRTEDLSERSRADRVHVPGSKSTRMARGTYLPXEA--SL*YTLMRSNCKSES 154
E+E +E+ +E S+ +H P S S R+ +GT SL L +NC S
Sbjct: 11 ENEGYESEEFAEYSKVQSIHSPRSSSGRIEKGTTRNGSVSFSLISALSATNCCKNS 66
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASXG 211
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 212 KYVPRAILVDLEPGTWTLS 268
Y PR +L DL+ LS
Sbjct: 83 -YTPRLLLYDLKGSLRNLS 100
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 425 QSHDSASFRTTSKTESTSS-APSV*CPLAQLLPAPDCQKTKLSGRKICPKGPERTESMCR 249
QSH ++++ ST S A S+ +A+ L +P + + G CP GP
Sbjct: 80 QSHRRQRRSPSNESNSTISLATSLAEEIAKHL-SPAVIRLCMGGSLTCPPGPRGPPGRPG 138
Query: 248 APSRRGWRGARTCRXR 201
P ++G RG R R R
Sbjct: 139 HPGQKGTRGRRGQRGR 154
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 429 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 262
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGID---PTGAYHGDSDLQLERINVYYNEASXG 211
+RE++ +Q G N +G +W I D P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 212 KYVPRAILVDLEPGTWTLS 268
Y PR +L DL+ LS
Sbjct: 83 -YTPRLLLYDLKGSLRNLS 100
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 196 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 95
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,603,444
Number of Sequences: 59808
Number of extensions: 386683
Number of successful extensions: 1158
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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