Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0985
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 151 3e-37
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 142 1e-34
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 142 1e-34
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 142 1e-34
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 138 4e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 106 1e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 106 1e-23
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 71 5e-13
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 71 5e-13
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 71 9e-13
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 71 9e-13
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 69 2e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 69 2e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 67 8e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 67 8e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 67 8e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 67 1e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 66 3e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 65 3e-11
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 64 8e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 64 8e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 59 3e-09
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 33 0.17
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 33 0.17
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 2.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 2.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical pr... 28 4.8
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 28 4.8
AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle colla... 28 4.8
AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle colla... 28 4.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 151 bits (367), Expect = 3e-37
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEAS GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 221 PRAILVDLEPGT 256
PRA LVDLEPGT
Sbjct: 61 PRACLVDLEPGT 72
Score = 131 bits (317), Expect = 3e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVR+GPFGQ+FRPDNFVF QSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQG
Sbjct: 73 MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 142 bits (345), Expect = 1e-34
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 221 PRAILVDLEPGT 256
PRA+LVDLEPGT
Sbjct: 61 PRAVLVDLEPGT 72
Score = 131 bits (316), Expect = 5e-31
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYTEGAELVD+VLDVVRKEAE CDCLQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 142 bits (345), Expect = 1e-34
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 221 PRAILVDLEPGT 256
PRA+LVDLEPGT
Sbjct: 61 PRAVLVDLEPGT 72
Score = 127 bits (307), Expect = 6e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQ+FRPDN+VF QSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES DCLQG
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 142 bits (345), Expect = 1e-34
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 221 PRAILVDLEPGT 256
PRA+LVDLEPGT
Sbjct: 61 PRAVLVDLEPGT 72
Score = 127 bits (307), Expect = 6e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQ+FRPDN+VF QSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES DCLQG
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 138 bits (333), Expect = 4e-33
Identities = 59/72 (81%), Positives = 67/72 (93%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 221 PRAILVDLEPGT 256
PRA+LVDLEPGT
Sbjct: 61 PRAVLVDLEPGT 72
Score = 130 bits (315), Expect = 6e-31
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYTEGAELVD+VLDV+RKEAE CDCLQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ E+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 136 bits (330), Expect = 9e-33
Identities = 58/72 (80%), Positives = 67/72 (93%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 221 PRAILVDLEPGT 256
PRA+LVDLEPGT
Sbjct: 61 PRAVLVDLEPGT 72
Score = 130 bits (315), Expect = 6e-31
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
MDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYTEGAELVD+VLDV+RKEAE CDCLQG
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQG 132
Query: 436 FQ 441
FQ
Sbjct: 133 FQ 134
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+ EYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENT
Sbjct: 156 REEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (255), Expect = 1e-23
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 221 PRAILVDLEP 250
PRAILVDL+P
Sbjct: 61 PRAILVDLDP 70
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/67 (52%), Positives = 51/67 (76%)
Frame = +1
Query: 241 LGARHMDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 420
L ++ VRS +G++F P+N V +SGAGNNW++G+Y +GAE+VD VL V+R+EAE+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAA 127
Query: 421 DCLQGFQ 441
D L+GFQ
Sbjct: 128 DSLEGFQ 134
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623
+ EY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N
Sbjct: 156 REEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDN 195
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 106 bits (255), Expect = 1e-23
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 221 PRAILVDLEP 250
PRAILVDL+P
Sbjct: 61 PRAILVDLDP 70
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/67 (52%), Positives = 51/67 (76%)
Frame = +1
Query: 241 LGARHMDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 420
L ++ VRS +G++F P+N V +SGAGNNW++G+Y +GAE+VD VL V+R+EAE+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAA 127
Query: 421 DCLQGFQ 441
D L+GFQ
Sbjct: 128 DSLEGFQ 134
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +3
Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623
+ EY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N
Sbjct: 156 REEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDN 195
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 74.9 bits (176), Expect = 4e-14
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G +G +F PD + + A NN+A+GHYT G EL+D VLD +RK+ E+C+ LQG
Sbjct: 78 LDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQG 137
Query: 436 F 438
F
Sbjct: 138 F 138
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASXGKYV 220
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 221 PRAILVDLEP 250
PRAI VDLEP
Sbjct: 66 PRAIYVDLEP 75
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVE 620
+SV P+P+VS +VVEPYN+ L+ H +E
Sbjct: 172 FSVYPAPQVSTSVVEPYNSILTTHTTLE 199
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+V VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHS 196
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASXGK 214
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E + GK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 215 YVPRAILVDLEP 250
+VPR + VDLEP
Sbjct: 67 HVPRCLFVDLEP 78
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + +F P+ + + A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 81 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 140
Query: 436 F 438
F
Sbjct: 141 F 141
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
EY + +++ P+P+VS ++VEPYN+ L H +E++
Sbjct: 166 EYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHS 204
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +2
Query: 35 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASX 208
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 209 GKYVPRAILVDLEP 250
GK+VPRAI+VDLEP
Sbjct: 64 GKHVPRAIMVDLEP 77
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + +F P+ + + A NN+A+GHYT G E++D V+D VR+ E+C LQG
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQG 139
Query: 436 F 438
F
Sbjct: 140 F 140
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + + + P+P+VS ++VEPYN+ L+ H +E++
Sbjct: 165 DYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHS 203
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/72 (50%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASXGK 214
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 215 YVPRAILVDLEP 250
+VPRAI VDLEP
Sbjct: 61 HVPRAIFVDLEP 72
Score = 67.7 bits (158), Expect = 6e-12
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + ++F P+ + + A NN+A+GHYT G EL+D V+D VR+ E C LQG
Sbjct: 75 IDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P++S ++VEPYN+ L+ H +E++
Sbjct: 160 DYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHS 198
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 67.3 bits (157), Expect = 8e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 YVPRAILVDLEP 250
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
Score = 64.1 bits (149), Expect = 8e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + +F P+ + + A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 67.3 bits (157), Expect = 8e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 YVPRAILVDLEP 250
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
Score = 64.1 bits (149), Expect = 8e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + +F P+ + + A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 67.3 bits (157), Expect = 8e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 YVPRAILVDLEP 250
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
Score = 64.1 bits (149), Expect = 8e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + +F P+ + + A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 436 F 438
F
Sbjct: 135 F 135
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 66.9 bits (156), Expect = 1e-11
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+ LD +R+ A++C LQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
Score = 66.9 bits (156), Expect = 1e-11
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G EL+D+ LD +R+ A++C LQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 436 F 438
F
Sbjct: 133 F 133
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + ++F P+ + + A NN+A+GHYT G E++D+ LD +R+ A +C+ LQG
Sbjct: 72 VDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQG 131
Query: 436 F 438
F
Sbjct: 132 F 132
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 221 PRAILVDLEP 250
PR+I VDLEP
Sbjct: 60 PRSIFVDLEP 69
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
EY + +S+ P+P++S +VVEPYN+ L+ H +E++
Sbjct: 157 EYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHS 195
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 217
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 218 VPRAILVDLEP 250
VPRA++VDLEP
Sbjct: 61 VPRAVMVDLEP 71
Score = 64.1 bits (149), Expect = 8e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D +R+G + +F P+ + + A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 74 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 133
Query: 436 F 438
F
Sbjct: 134 F 134
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
+Y + +S+ P+P+VS VVEPYN+ L+ H +E++
Sbjct: 159 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 197
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2
Query: 50 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVPRA 229
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 230 ILVDLEP 250
+LVDLEP
Sbjct: 66 VLVDLEP 72
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*Q--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
++S F +F DN GAGNNWA G Y +G E+ + ++D++ +EAE+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDG 136
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 495 LQNQRE-YPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVEN 623
L+ RE +P +++ TYSV + S D VV PYN LS+ +L+EN
Sbjct: 156 LERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIEN 200
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2
Query: 50 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVPRA 229
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 230 ILVDLEP 250
+LVDLEP
Sbjct: 66 VLVDLEP 72
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 265 VRSGPFGQIFRPDNFVF*Q--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
++S F +F DN GAGNNWA G Y +G E+ + ++D++ +EAE+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDG 136
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 495 LQNQRE-YPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVEN 623
L+ RE +P +++ TYSV + S D VV PYN LS+ +L+EN
Sbjct: 156 LERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIEN 200
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435
+D VR+G + +F P+ + + A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 53 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 112
Query: 436 F 438
F
Sbjct: 113 F 113
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 119 EHGIDPTGAYHGDSDL---QLERINVYYNEASXGKYVPRAILVDLEP 250
EHGI P G YH + D + E IN ++ E + GK+VPR + VDLEP
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP 50
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 510 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENT 626
EY + +++ P+P+VS ++VEPYN+ L H +E++
Sbjct: 138 EYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHS 176
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 329 APDCQKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
A D Q T +G CP+GP + AP RG RGAR
Sbjct: 179 AEDVQNTPPTGCFTCPQGPLGPQGPNGAPGLRGMRGAR 216
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 329 APDCQKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
A D Q T +G CP+GP + AP RG RGAR
Sbjct: 179 AEDVQNTPPTGCFTCPQGPLGPQGPNGAPGLRGMRGAR 216
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 298 DGRSVRKVQSGQSPCAGLQVDEDGAGHVLAAGGFI 194
D S + G++P AG G GHV +AGG I
Sbjct: 483 DEYSALMAELGETPAAGAGAGGGGGGHVASAGGGI 517
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 298 DGRSVRKVQSGQSPCAGLQVDEDGAGHVLAAGGFI 194
D S + G++P AG G GHV +AGG I
Sbjct: 483 DEYSALMAELGETPAAGAGAGGGGGGHVASAGGGI 517
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 401 RTTSKTESTSSAPSV*CPLAQLLPAPDCQKTKLSGRKICPKGPERTESMCRAPSRR 234
R S ++S S AP ++ PAP ++ S K P P+R +S ++P R
Sbjct: 319 RRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPAR 374
>Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical
protein ZK836.1 protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 326 PDCQKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
PD ++ G CP+G + AP RG RGAR
Sbjct: 154 PDVEQQPSQGCFTCPQGLPGPQGSQGAPGIRGMRGAR 190
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 317 QKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
Q + +G CP+GP+ + P RG RGAR
Sbjct: 125 QTQQYAGCFTCPQGPQGPQGPQGKPGVRGMRGAR 158
>AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle collagen
LON-3 protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 326 PDCQKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
PD ++ G CP+G + AP RG RGAR
Sbjct: 154 PDVEQQPSQGCFTCPQGLPGPQGSQGAPGIRGMRGAR 190
>AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle collagen
protein LON-3 protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 326 PDCQKTKLSGRKICPKGPERTESMCRAPSRRGWRGAR 216
PD ++ G CP+G + AP RG RGAR
Sbjct: 154 PDVEQQPSQGCFTCPQGLPGPQGSQGAPGIRGMRGAR 190
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 426 PPGIPTDTLARXRHR--FRYGHPPHLQNQREYP 518
PP +P T+ H F G PPH Q +YP
Sbjct: 56 PPSLPPSTMPPGPHGMPFMGGPPPHHQYHLQYP 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,497,302
Number of Sequences: 27780
Number of extensions: 272375
Number of successful extensions: 873
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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