BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf0985 (627 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 138 2e-33 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 137 5e-33 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 137 5e-33 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 137 5e-33 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 133 8e-32 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 133 1e-31 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 132 2e-31 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 132 2e-31 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 132 2e-31 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 6e-13 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 6e-13 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 70 1e-12 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 70 1e-12 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 70 1e-12 At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 68 6e-12 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 68 6e-12 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 67 8e-12 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 67 8e-12 At4g37190.1 68417.m05265 expressed protein 34 0.067 At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.83 At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 29 2.5 At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.3 At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 28 5.8 At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 28 5.8 At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 28 5.8 At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 28 5.8 At1g45201.2 68414.m05185 lipase class 3 family protein Since thi... 28 5.8 At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 5.8 At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 7.7 At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 7.7 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 138 bits (335), Expect = 2e-33 Identities = 59/72 (81%), Positives = 67/72 (93%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60 Query: 221 PRAILVDLEPGT 256 PRAIL+DLEPGT Sbjct: 61 PRAILMDLEPGT 72 Score = 129 bits (312), Expect = 1e-30 Identities = 56/62 (90%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDSVR+GP+GQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQG Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 137 bits (332), Expect = 5e-33 Identities = 59/72 (81%), Positives = 66/72 (91%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 128 bits (310), Expect = 2e-30 Identities = 56/62 (90%), Positives = 60/62 (96%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGP+GQ FRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQG Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 137 bits (332), Expect = 5e-33 Identities = 59/72 (81%), Positives = 66/72 (91%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 128 bits (310), Expect = 2e-30 Identities = 56/62 (90%), Positives = 60/62 (96%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGP+GQ FRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQG Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 137 bits (332), Expect = 5e-33 Identities = 59/73 (80%), Positives = 68/73 (93%), Gaps = 1/73 (1%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASXGKY 217 MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEAS G+Y Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60 Query: 218 VPRAILVDLEPGT 256 VPRA+L+DLEPGT Sbjct: 61 VPRAVLMDLEPGT 73 Score = 130 bits (314), Expect = 7e-31 Identities = 56/62 (90%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGP+GQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQG Sbjct: 74 MDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133 Query: 436 FQ 441 FQ Sbjct: 134 FQ 135 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 157 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 196 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 133 bits (322), Expect = 8e-32 Identities = 59/72 (81%), Positives = 65/72 (90%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEAS GKYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 128 bits (308), Expect = 4e-30 Identities = 57/62 (91%), Positives = 60/62 (96%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+ DCLQG Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.8 bits (178), Expect = 2e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 133 bits (321), Expect = 1e-31 Identities = 59/73 (80%), Positives = 66/73 (90%), Gaps = 1/73 (1%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASXGKY 217 MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEAS G+Y Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60 Query: 218 VPRAILVDLEPGT 256 VPRA+L+DLEPGT Sbjct: 61 VPRAVLMDLEPGT 73 Score = 131 bits (317), Expect = 3e-31 Identities = 57/62 (91%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQG Sbjct: 74 MDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133 Query: 436 FQ 441 FQ Sbjct: 134 FQ 135 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 157 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 196 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 132 bits (319), Expect = 2e-31 Identities = 56/72 (77%), Positives = 66/72 (91%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 132 bits (318), Expect = 2e-31 Identities = 58/62 (93%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDSVRSGP+GQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQG Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.8 bits (178), Expect = 2e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 132 bits (318), Expect = 2e-31 Identities = 55/72 (76%), Positives = 65/72 (90%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 132 bits (318), Expect = 2e-31 Identities = 58/62 (93%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDSVRSGP+GQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQG Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 75.4 bits (177), Expect = 3e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 132 bits (318), Expect = 2e-31 Identities = 58/62 (93%), Positives = 61/62 (98%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 MDS+RSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQG Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132 Query: 436 FQ 441 FQ Sbjct: 133 FQ 134 Score = 131 bits (316), Expect = 4e-31 Identities = 58/72 (80%), Positives = 64/72 (88%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 220 MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEAS GKYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60 Query: 221 PRAILVDLEPGT 256 PRA+L+DLEPGT Sbjct: 61 PRAVLMDLEPGT 72 Score = 75.8 bits (178), Expect = 2e-14 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 504 QREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 623 + EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 70.9 bits (166), Expect = 6e-13 Identities = 31/69 (44%), Positives = 45/69 (65%) Frame = +2 Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVP 223 REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62 Query: 224 RAILVDLEP 250 RA+L+DLEP Sbjct: 63 RALLIDLEP 71 Score = 46.8 bits (106), Expect = 1e-05 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Frame = +1 Query: 241 LGARHMDSVRSGPFGQIFRPDNFVF*Q--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 414 L R ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+ Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127 Query: 415 SCDCLQGF 438 D L+GF Sbjct: 128 GSDSLEGF 135 Score = 35.9 bits (79), Expect = 0.022 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +3 Query: 513 YPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVEN 623 Y +++ TYSV P+ + SD VV+PYN+ L++ +L N Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLN 198 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 70.9 bits (166), Expect = 6e-13 Identities = 31/69 (44%), Positives = 45/69 (65%) Frame = +2 Query: 44 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVP 223 REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62 Query: 224 RAILVDLEP 250 RA+L+DLEP Sbjct: 63 RALLIDLEP 71 Score = 46.8 bits (106), Expect = 1e-05 Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Frame = +1 Query: 241 LGARHMDSVRSGPFGQIFRPDN-FVF*QSG-AGNNWAKGHYTEGAELVDSVLDVVRKEAE 414 L R ++ +++G + ++ +N FV G AGNNWA G Y +G + + ++D++ +EA+ Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127 Query: 415 SCDCLQGF 438 D L+GF Sbjct: 128 GSDSLEGF 135 Score = 35.9 bits (79), Expect = 0.022 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +3 Query: 513 YPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVEN 623 Y +++ TYSV P+ + SD VV+PYN+ L++ +L N Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLN 198 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 70.1 bits (164), Expect = 1e-12 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 214 MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 68.1 bits (159), Expect = 4e-12 Identities = 30/61 (49%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD VRK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/30 (56%), Positives = 24/30 (80%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 +++ PSP+VS VVEPYN+ LS H L+E+T Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHT 198 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 70.1 bits (164), Expect = 1e-12 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 214 MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 68.1 bits (159), Expect = 4e-12 Identities = 30/61 (49%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD VRK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/30 (56%), Positives = 24/30 (80%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 +++ PSP+VS VVEPYN+ LS H L+E+T Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHT 198 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 69.7 bits (163), Expect = 1e-12 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 214 MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+ Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ +DLEP Sbjct: 61 HVPRAVFLDLEP 72 Score = 66.5 bits (155), Expect = 1e-11 Identities = 28/61 (45%), Positives = 43/61 (70%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD+ L+ +RK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/30 (56%), Positives = 24/30 (80%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 +++ PSP+VS VVEPYN+ LS H L+E+T Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHT 198 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 67.7 bits (158), Expect = 6e-12 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214 MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 67.3 bits (157), Expect = 8e-12 Identities = 29/61 (47%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD +RK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 44.4 bits (100), Expect = 6e-05 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 ++V PSP+VS +VVEPYN+ LS H L+E+T Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHT 198 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 67.7 bits (158), Expect = 6e-12 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214 MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 67.3 bits (157), Expect = 8e-12 Identities = 29/61 (47%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD +RK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 44.4 bits (100), Expect = 6e-05 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 ++V PSP+VS +VVEPYN+ LS H L+E+T Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHT 198 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 67.3 bits (157), Expect = 8e-12 Identities = 29/61 (47%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD +RK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 65.3 bits (152), Expect = 3e-11 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214 MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 44.4 bits (100), Expect = 6e-05 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 ++V PSP+VS +VVEPYN+ LS H L+E+T Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHT 198 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 67.3 bits (157), Expect = 8e-12 Identities = 29/61 (47%), Positives = 42/61 (68%) Frame = +1 Query: 256 MDSVRSGPFGQIFRPDNFVF*QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 435 +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD LD +RK A++C LQG Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134 Query: 436 F 438 F Sbjct: 135 F 135 Score = 65.3 bits (152), Expect = 3e-11 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 214 MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 215 YVPRAILVDLEP 250 +VPRA+ VDLEP Sbjct: 61 HVPRAVFVDLEP 72 Score = 44.4 bits (100), Expect = 6e-05 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = +3 Query: 537 YSVVPSPKVSDTVVEPYNATLSVHQLVENT 626 ++V PSP+VS +VVEPYN+ LS H L+E+T Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHT 198 >At4g37190.1 68417.m05265 expressed protein Length = 562 Score = 34.3 bits (75), Expect = 0.067 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +2 Query: 41 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERI-NVYYNEASX 208 MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + + Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60 Query: 209 GKYVPRAILVDLEPGTWTLSA 271 Y PR + V+L+ T+S+ Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81 >At2g31580.1 68415.m03858 expressed protein contains Pfam profile: PF04446 family of unknown function (DUF549) Length = 567 Score = 30.7 bits (66), Expect = 0.83 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +1 Query: 373 LVDSVLDVVRKEAESCDCLQGF 438 +++SV VVRKEAE+C+CLQ F Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21 >At1g22610.1 68414.m02823 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 1029 Score = 29.1 bits (62), Expect = 2.5 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3 Query: 465 HRFRYGHPPHL-----QNQREYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 605 +R+R HPPH+ Q +PD + + P+ + +D V Y+ SV Sbjct: 889 YRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVRMRYDRLRSV 940 >At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 304 Score = 28.7 bits (61), Expect = 3.3 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 448 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 335 VS G+PG HT P ++ ++ +++ P S PW SC Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172 >At3g57880.1 68416.m06452 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 773 Score = 27.9 bits (59), Expect = 5.8 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3 Query: 465 HRFRYGHPPHLQNQ-----REYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 605 +R+R HPPH+ + +PD + + P+ + SD V Y+ S+ Sbjct: 633 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684 >At3g19570.2 68416.m02482 expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566) Length = 644 Score = 27.9 bits (59), Expect = 5.8 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = -2 Query: 422 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCQKTKLSGRKI--CPKG-PERTESMC 252 SH + + TT+ + STSS+ SV ++ P+P +T S + P P+R++S+ Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRSQSVD 116 Query: 251 R 249 R Sbjct: 117 R 117 >At3g19570.1 68416.m02481 expressed protein contains Pfam domain, PF04484: Family of unknown function (DUF566) Length = 627 Score = 27.9 bits (59), Expect = 5.8 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = -2 Query: 422 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCQKTKLSGRKI--CPKG-PERTESMC 252 SH + + TT+ + STSS+ SV ++ P+P +T S + P P+R++S+ Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRSQSVD 116 Query: 251 R 249 R Sbjct: 117 R 117 >At1g51570.1 68414.m05804 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 776 Score = 27.9 bits (59), Expect = 5.8 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3 Query: 465 HRFRYGHPPHLQNQ-----REYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 605 +R+R HPPH+ + +PD + + P+ + SD V Y+ S+ Sbjct: 636 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687 >At1g45201.2 68414.m05185 lipase class 3 family protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon Length = 479 Score = 27.9 bits (59), Expect = 5.8 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = -3 Query: 523 LSGYSL*FWR*GGXPYRNRCRXRASVSVGI--PGGNHTIPLPFERRLKLNRRAQHPPCSV 350 + + L FW+ G Y+ R VGI PGG++ P + +L + PP + Sbjct: 413 IRSFILQFWK--GDEYKENWLMRFVRVVGIVFPGGSNHFPFDYVNSTRLGGLVRPPPTTT 470 Query: 349 P 347 P Sbjct: 471 P 471 >At1g21850.1 68414.m02735 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase Length = 551 Score = 27.9 bits (59), Expect = 5.8 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = -3 Query: 211 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 32 AAGGF + I + + ++ VP G VL+GD DL A L + FP +L Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194 >At4g20990.1 68417.m03038 carbonic anhydrase family protein similar to storage protein (dioscorin) [Dioscorea cayenensis] GI:433463; contains Pfam profile PF00194: Eukaryotic-type carbonic anhydrase Length = 267 Score = 27.5 bits (58), Expect = 7.7 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = +2 Query: 89 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVPRAILV 238 G + W I+ + TG Y DL ER+++ +++A +Y P ++ Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94 >At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872, (1-4)-beta-mannan endohydrolase GB:AAB87859 [Lycopersicon esculentum]; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5) Length = 408 Score = 27.5 bits (58), Expect = 7.7 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 47 EIVHIQAGQCGNQIGAKFWEIISD 118 +I++ A + G+ GA FWE+IS+ Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,797,342 Number of Sequences: 28952 Number of extensions: 257365 Number of successful extensions: 802 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 740 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 793 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1275599520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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