Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0982
         (275 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    29   3.5  
BC074796-1|AAH74796.1|  425|Homo sapiens hypocretin (orexin) rec...    27   8.0  
AY070269-1|AAL50221.1|  425|Homo sapiens hypocretin receptor 1 p...    27   8.0  
AY062030-1|AAL47214.1|  425|Homo sapiens hypocretin receptor 1 p...    27   8.0  
AF202084-1|AAG28020.1|  425|Homo sapiens hypocretin receptor-1 p...    27   8.0  
AF041243-1|AAC39601.1|  425|Homo sapiens orexin receptor-1 protein.    27   8.0  

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 102 FVIVKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSNDMKSLIIFL 245
           ++ + ICI I   +   ++   H + Y YT L+   LS D  SL ++L
Sbjct: 185 YIHIYICIHICVYSYIHMYTYIHTYTYTYTQLFFNHLSIDEHSLFLYL 232


>BC074796-1|AAH74796.1|  425|Homo sapiens hypocretin (orexin)
           receptor 1 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  AFVIVKICILIGSTTSYSLFWLNHYFRYIYTY 194
           A+V V +  L+G+T      W NH+ R +  Y
Sbjct: 52  AYVAVFVVALVGNTLVCLAVWRNHHMRTVTNY 83


>AY070269-1|AAL50221.1|  425|Homo sapiens hypocretin receptor 1
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  AFVIVKICILIGSTTSYSLFWLNHYFRYIYTY 194
           A+V V +  L+G+T      W NH+ R +  Y
Sbjct: 52  AYVAVFVVALVGNTLVCLAVWRNHHMRTVTNY 83


>AY062030-1|AAL47214.1|  425|Homo sapiens hypocretin receptor 1
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  AFVIVKICILIGSTTSYSLFWLNHYFRYIYTY 194
           A+V V +  L+G+T      W NH+ R +  Y
Sbjct: 52  AYVAVFVVALVGNTLVCLAVWRNHHMRTVTNY 83


>AF202084-1|AAG28020.1|  425|Homo sapiens hypocretin receptor-1
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  AFVIVKICILIGSTTSYSLFWLNHYFRYIYTY 194
           A+V V +  L+G+T      W NH+ R +  Y
Sbjct: 52  AYVAVFVVALVGNTLVCLAVWRNHHMRTVTNY 83


>AF041243-1|AAC39601.1|  425|Homo sapiens orexin receptor-1 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  AFVIVKICILIGSTTSYSLFWLNHYFRYIYTY 194
           A+V V +  L+G+T      W NH+ R +  Y
Sbjct: 52  AYVAVFVVALVGNTLVCLAVWRNHHMRTVTNY 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,094,688
Number of Sequences: 237096
Number of extensions: 555342
Number of successful extensions: 720
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)