Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0970
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = +2

Query: 140  TSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSSWRAGRTIAPWCCQRCCRR 310
            T P  P     P+  T V +  AS    +     T  S+W +  T +PW      RR
Sbjct: 1004 TKPPEPVTPAPPQVTTGVDTG-ASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRR 1059


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 145 TVVSNGLAVSRGVHDRIELQGIVEFAVVDEEQDVVFVLAGWKN 273
           + +S  L    G  D I +Q I+EF+V +      F    WK+
Sbjct: 155 SAISRLLRGKGGECDEITIQAILEFSVTNPTIKEDFCAVLWKD 197


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 337 LQVDVLIF-KYWLYLVLWA 390
           LQV  + F  YWLYLVL A
Sbjct: 49  LQVLFVSFVSYWLYLVLEA 67


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 337 LQVDVLIF-KYWLYLVLWA 390
           LQV  + F  YWLYLVL A
Sbjct: 67  LQVLFVSFVSYWLYLVLEA 85


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 233 KNRTSFSSWRAGRTIAPW 286
           KN  + + W  G+T  PW
Sbjct: 335 KNAEALAKWANGQTGFPW 352


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 159 VGHDGEVSGLPEIYSWF 109
           +GH  E    P++YS+F
Sbjct: 103 LGHPLESVPFPQVYSYF 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,991
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)