Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0953
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 112 2e-25
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 112 2e-25
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 112 2e-25
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 48 8e-06
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 47 1e-05
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 47 1e-05
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 44 1e-04
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 41 0.001
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 37 0.015
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 36 0.036
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 34 0.082
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 34 0.082
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 34 0.082
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 34 0.082
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 34 0.082
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 34 0.11
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 34 0.11
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 33 0.14
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 33 0.14
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 32 0.33
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 32 0.33
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 32 0.33
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 32 0.33
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 28 5.4
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 28 5.4
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 28 5.4
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 5.4
Z81575-2|CAB04639.1| 339|Caenorhabditis elegans Hypothetical pr... 28 7.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 7.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical p... 27 9.4
Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical p... 27 9.4
Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 27 9.4
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 27 9.4
AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GA... 27 9.4
AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GA... 27 9.4
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 112 bits (270), Expect = 2e-25
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Frame = +3
Query: 57 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 236
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 237 REFLLPR----EQILRPLS 281
+EFLLPR EQI LS
Sbjct: 72 QEFLLPRGTNPEQISSTLS 90
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 236 QGVFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAI 340
Q + +GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 72 QEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 106
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 112 bits (270), Expect = 2e-25
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Frame = +3
Query: 57 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 236
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 109 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 168
Query: 237 REFLLPR----EQILRPLS 281
+EFLLPR EQI LS
Sbjct: 169 QEFLLPRGTNPEQISSTLS 187
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 236 QGVFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAI 340
Q + +GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 169 QEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 203
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 112 bits (270), Expect = 2e-25
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Frame = +3
Query: 57 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 236
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 123 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 182
Query: 237 REFLLPR----EQILRPLS 281
+EFLLPR EQI LS
Sbjct: 183 QEFLLPRGTNPEQISSTLS 201
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 236 QGVFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAI 340
Q + +GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 183 QEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 217
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 48 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTK- 215
S WD N +++ + ++ DV +TP+EI VK +LL+H +HE +SD
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHG 71
Query: 216 SVYREYNREFLLP 254
+V RE NR + LP
Sbjct: 72 TVAREINRAYKLP 84
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT-KSVYREYNREFLLP 254
DVSQ+ PEE+ V VDN+L++ KH EK+D V R + R++ LP
Sbjct: 62 DVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLP 107
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 257 GTNPEAIKSSLSRDGVLTVE 316
G PE IKS LS +GVLTV+
Sbjct: 109 GVRPEQIKSELSNNGVLTVK 128
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT-KSVYREYNREFLLP 254
DVSQ+ PEE+ V VDN+L++ KH EK+D V R + R++ LP
Sbjct: 61 DVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLP 106
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 257 GTNPEAIKSSLSRDGVLTVE 316
G PE IKS LS +GVLTV+
Sbjct: 108 GVRPEQIKSELSNNGVLTVK 127
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +3
Query: 63 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREY-NR 239
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++ +HE+ D + + Y R
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVR 159
Query: 240 EFLLPREQILRPLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRSTE-RSHHSPRVH*GS 410
++ LPR+ + L + N+ + G E HHSPR G+
Sbjct: 160 KYQLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAGHHSPRFENGT 217
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 36 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT- 212
++ PS S N L + DVS+Y + + V VDN ++V H EK DT
Sbjct: 58 ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTY 117
Query: 213 KSVYREYNREFLLPR 257
++ + R F LP+
Sbjct: 118 GTIESTFKRRFPLPK 132
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 266 PEAIKSSLSRDGVLTVEAPLPQ 331
PE+++S L+ DG LT++A P+
Sbjct: 136 PESVQSQLTADGHLTIDAKAPE 157
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 87 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
E + ++ DV+ + PEE+ V + L + HE K++ R + R+F LP++
Sbjct: 47 ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPKD 104
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 57 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 236
D++ ++ DE ++ DVS + PE + +K +L + E KS+ + R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFS 98
Query: 237 REFLLPRE 260
+ LLP +
Sbjct: 99 KMILLPED 106
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 96 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP +
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 101
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 96 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP +
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 101
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 96 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP +
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 101
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +3
Query: 57 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 236
D++ ++ DE ++ DVS + PE++ ++ +L + E+KS+ R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFS 98
Query: 237 REFLLPRE 260
+ LLP +
Sbjct: 99 KMILLPED 106
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 97 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 137
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP +
Sbjct: 53 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 102
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 96 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + L + + E K+D + ++R LLP +
Sbjct: 52 INLNVSQFKPEDLKINLDGRTLSIQGEQELKTDHGYSKKSFSRVILLPED 101
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 242 VFVAQGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 367
+ + + + A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 96 ILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VSQ+ PE++ + L + + E K+D + ++R LLP +
Sbjct: 52 INLNVSQFKPEDLKINLDGRTLSIQGEQELKTDHGYSKKSFSRVILLPED 101
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE + +K +L + E KS+ + R +++ LLP +
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPED 59
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE + +K +L + E KS+ + R +++ LLP +
Sbjct: 50 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPED 105
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP +
Sbjct: 42 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPED 97
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP +
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPED 105
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP +
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPED 105
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 93 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP +
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPED 105
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEE-KSDTKSVYREYNREFLLPREQILRPLS 281
+ +V PEE+ + KL + A+H+E ++D S + Y++ +LP + + LS
Sbjct: 53 VNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDVTHLS 110
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +3
Query: 111 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPRE 260
+ +VS + PEE+ V +L + +H+ +++ + + ++R LLP +
Sbjct: 54 VNLNVSNFKPEELKVNLEGRQLSIQGEHDVENEHGASRKSFSRMILLPED 103
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 66 NSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEK-SDTKSVYREYNRE 242
N +++ + ++ D + P +I VK ++++H +H+ + ++ V RE +R
Sbjct: 21 NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRT 80
Query: 243 FLLPRE 260
+ LP +
Sbjct: 81 YKLPED 86
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 255 WATKTPCCILCTQISYQISPRVWHGPVI 172
WAT + C +C+ S ++ RVW P +
Sbjct: 154 WATISTCDGICSTTSVNLTARVWRPPTV 181
>Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical
protein R07B1.5 protein.
Length = 160
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 657 TSNSTSTVKANVTKATLTRRPCPTTQIGI 571
TS ST+TV T T C T QIGI
Sbjct: 43 TSTSTTTVTTTTTVVTAACATCTTAQIGI 71
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical
protein ZC376.6 protein.
Length = 1152
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 342 VMASCGNGASTVSTPSRDSEDLMASGFVPWATKTPCCIL 226
++A N A TV +P +S G PW T+ C++
Sbjct: 327 IIARLLNMADTVISPRPESTSFSEMGTAPWCTRLSYCLV 365
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 254 QGTNPEAIKSSLSRDGVLTVEAPLP 328
Q T+P +K+ +++ GV T +AP+P
Sbjct: 122 QNTDPGVLKTFITQQGVRTADAPVP 146
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 254 QGTNPEAIKSSLSRDGVLTVEAPLP 328
Q T+P +K+ +++ GV T +AP+P
Sbjct: 122 QNTDPGVLKTFITQQGVRTADAPVP 146
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 141 EEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFL 248
EEIVVK D+K LV K +EK + +YN E L
Sbjct: 1367 EEIVVKKSDDKFLV--KVDEKKVNPTELEQYNIEIL 1400
>Z81575-2|CAB04639.1| 339|Caenorhabditis elegans Hypothetical
protein R08H2.2 protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 497 LILVISKFINTTYLLVVICQLMFLRIPICVVGHGLRVNVALVTFA 631
+ L++ I ++ + I L+F PI +G G +NVA+ T A
Sbjct: 251 IALIVQAVIPIVFMYIPI--LLFFTTPIFHIGFGPYINVAMATLA 293
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 657 TSNSTSTVKANVTKATLTRRPCPTT 583
TS STST T T T P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 657 TSNSTSTVKANVTKATLTRRPCPTT 583
TS STST T T T P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 66 NSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVY----REY 233
N +++ + ++ D + P +I VK ++++H +H+ + + Y RE
Sbjct: 21 NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREV 80
Query: 234 NREFLLPRE 260
+R + LP +
Sbjct: 81 HRTYKLPED 89
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 660 PTSNSTSTVKANVTKATLTRRPCPTT 583
PT+ TST T T+T P PTT
Sbjct: 90 PTTTPTSTQTTTPTTTTITTTPVPTT 115
>Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical
protein T21C12.1i protein.
Length = 157
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 72 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 131
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 132 ILLYKSK 138
>Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical
protein T21C12.1h protein.
Length = 264
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 179 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 238
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 239 ILLYKSK 245
>Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical
protein T21C12.1f protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 363 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 422
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 423 ILLYKSK 429
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical protein
T21C12.1a protein.
Length = 1106
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 1021 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 1080
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 1081 ILLYKSK 1087
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 66 NSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVY----REY 233
N +++ + ++ D + P +I VK ++++H +H+ + + Y RE
Sbjct: 21 NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREV 80
Query: 234 NREFLLPRE 260
+R + LP +
Sbjct: 81 HRTYKLPED 89
>AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49Cshort protein.
Length = 264
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 179 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 238
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 239 ILLYKSK 245
>AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49C protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 645 TSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSKYVVLINFEITKIRF*INNADFCL 466
T + +V A T PT+ I + K N + ++ +++ + F + N F L
Sbjct: 363 TPDILHDVRLAECTCNAAPTSIIAVIKQSNRFCVSHSHIDIVSRAAFPLVFILFNTLFWL 422
Query: 465 ILIYKRK 445
IL+YK K
Sbjct: 423 ILLYKSK 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,577,175
Number of Sequences: 27780
Number of extensions: 312324
Number of successful extensions: 1061
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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