Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0951
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0304 - 16640937-16642877                                         31   0.94 
08_02_1280 + 25846557-25846871,25847278-25847349,25847441-258475...    31   1.2  
03_01_0632 - 4647271-4648704                                           30   1.6  
05_07_0073 - 27504169-27504882,27504989-27505161,27505302-275054...    29   2.9  
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199...    29   3.8  
05_01_0164 + 1134815-1134911,1135078-1135278,1135875-1136156,113...    29   5.0  
09_04_0625 - 19044775-19045078,19045178-19045382,19045534-190461...    28   6.6  

>10_08_0304 - 16640937-16642877
          Length = 646

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 134 SKATPENIARAKIIIDRLEANGGTNIDAALGTAIDLIRNR 253
           S+ T    A AK  +  L A GGTNI AAL  A  ++ +R
Sbjct: 227 SRMTDAGKAHAKRAVGSLSARGGTNIGAALRKAAKVLDDR 266


>08_02_1280 +
           25846557-25846871,25847278-25847349,25847441-25847599,
           25847971-25848099,25848194-25848310,25848434-25848535,
           25848759-25848917,25849090-25849464
          Length = 475

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 283 NKDEILSLEPIIIFLTDGDPTVGEMNPKTIIKNVAEKNYGSDEATIFSLAFGEDADPKLL 462
           NKDEI  L  ++I   D    V    PK  +K     +   D     +L++G +  PKL+
Sbjct: 168 NKDEIEYLRRLVIH-KDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLV 226

Query: 463 RKLSLRNNG 489
            +L   ++G
Sbjct: 227 HRLDRESSG 235


>03_01_0632 - 4647271-4648704
          Length = 477

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 665 HHLGPRVVRTELGLGHTAFDHLIRCVDKFDM*QQRRGDLSVEVAQLQ 525
           HH GPR+      L H A   L RC  + +  QQ R D+   VA+L+
Sbjct: 12  HHHGPRI------LAHIAVQRLKRCSIRTNKMQQSRQDVDEHVAELR 52


>05_07_0073 -
           27504169-27504882,27504989-27505161,27505302-27505485,
           27505604-27505675,27506173-27506733,27506846-27507145
          Length = 667

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 510 ASDAALQLRDFYRQVSSPLLSHV 578
           A DA ++ RD+   + SPLLSHV
Sbjct: 476 AEDATVRERDYIEPIKSPLLSHV 498


>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
            33319949-33320011,33320103-33320496,33320684-33320796,
            33320932-33321639,33321667-33323199,33323395-33323607,
            33323718-33324700,33324890-33325423,33325694-33325820,
            33326083-33326162,33327347-33327377,33327949-33328053,
            33328119-33328124,33328349-33328985,33329144-33329478,
            33330394-33331113
          Length = 2792

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
 Frame = +1

Query: 322  FLTDGDPTVGEMNPK---TIIKNVAEKNYGSDEA 414
            F+T+  PT+GE+NP+    +I+ +  + +G D++
Sbjct: 1115 FITNKSPTLGEVNPEEATLVIETIRREEFGLDQS 1148


>05_01_0164 +
           1134815-1134911,1135078-1135278,1135875-1136156,
           1136237-1136271,1136356-1136445,1137228-1137357,
           1137400-1138004,1138128-1138562
          Length = 624

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
 Frame = +2

Query: 65  KEPPKRKYSYYDRHDVKPTLKP-------ASKATPENIARAKIIIDRLEANGG-TNIDAA 220
           KEP   +       +VKP+LKP       A+   P N A A  I D+  + GG TN+ + 
Sbjct: 228 KEPTTARVPISGSTEVKPSLKPPRALPRVATMRAPTNTAVASGIPDKRSSTGGKTNMYSL 287

Query: 221 LGTAID 238
           +G  ++
Sbjct: 288 VGGVVN 293


>09_04_0625 -
           19044775-19045078,19045178-19045382,19045534-19046168,
           19046334-19047391
          Length = 733

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 487 RCCGATTCAGAWDPHPHRKQVKISWLHHFRNS 392
           +CC AT C   WD   H    KIS L   R S
Sbjct: 588 QCCSATGCERNWDIFHHIHSRKISRLERSRLS 619


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,830,650
Number of Sequences: 37544
Number of extensions: 392623
Number of successful extensions: 1129
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)