Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0951
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53705| Best HMM Match : Cornifin (HMM E-Value=1.3) 31 0.96
SB_37528| Best HMM Match : Cornifin (HMM E-Value=0.97) 31 0.96
SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20) 31 1.3
SB_59382| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_71| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1) 29 5.1
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_53705| Best HMM Match : Cornifin (HMM E-Value=1.3)
Length = 308
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP+ ASMLVPP+AS L
Sbjct: 153 SMLVPTYASMLVPPYASML 171
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP ASMLVPP+AS L
Sbjct: 46 LYASMLVPLYASMLVPPYASML 67
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
S+ VP ASMLVPP+ASSL
Sbjct: 201 SILVPPYASMLVPPYASSL 219
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+ASSL
Sbjct: 281 SMLVPPYASILVPPYASSL 299
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP AS+LVPP+ASSL
Sbjct: 70 LYASILVPPYASILVPPYASSL 91
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+AS+L
Sbjct: 129 SMLVPLYASILVPPYASTL 147
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP ASMLVPP+AS L
Sbjct: 270 LYASILVPPYASMLVPPYASIL 291
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
S+ VP AS LVPP+ASSL
Sbjct: 17 SILVPPYASTLVPPYASSL 35
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+AS L
Sbjct: 65 SMLVPLYASILVPPYASIL 83
>SB_37528| Best HMM Match : Cornifin (HMM E-Value=0.97)
Length = 443
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP ASMLVPP+AS L
Sbjct: 118 LYASMLVPPYASMLVPPYASML 139
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP ASMLVPP+AS L
Sbjct: 150 LYASMLVPPYASMLVPPYASML 171
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP ASMLVPP+AS L
Sbjct: 110 LYASMLVPLYASMLVPPYASML 131
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP ASMLVPP+AS L
Sbjct: 62 LYASMLVPLYASMLVPPYASIL 83
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 89 SMLVPPYASMLVPPYASML 107
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 129 SMLVPPYASMLVPPYASML 147
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 161 SMLVPPYASMLVPPYASML 179
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 169 SMLVPPYASMLVPPYASML 187
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 177 SMLVPPYASMLVPPYASML 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 145 SMLVPLYASMLVPPYASML 163
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 25 SMLVPVYASMLVPPYASIL 43
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS L
Sbjct: 70 LYASMLVPPYASILVPPYASML 91
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP ASMLVPP+AS L
Sbjct: 214 LYASILVPPYASMLVPPYASML 235
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS L
Sbjct: 206 LYASMLVPLYASILVPPYASML 227
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP ASMLVPP+AS L
Sbjct: 374 LYASILVPLYASMLVPPYASML 395
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+AS+L
Sbjct: 417 SMLVPLYASILVPPYASTL 435
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
S+ VP ASMLVPP+AS L
Sbjct: 81 SILVPPYASMLVPPYASML 99
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS L
Sbjct: 254 LYASMLVPLYASILVPPYASIL 275
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+AS L
Sbjct: 33 SMLVPPYASILVPPYASIL 51
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP AS+LVPP+AS L
Sbjct: 262 LYASILVPPYASILVPPYASML 283
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS LVPP+AS L
Sbjct: 334 LYASMLVPLYASTLVPPYASIL 355
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP AS+LVPP+AS L
Sbjct: 393 SMLVPLYASILVPPYASIL 411
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP AS+LVPP+AS L
Sbjct: 398 LYASILVPPYASILVPPYASML 419
>SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20)
Length = 1362
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 301 TGFHLCWKMLNWQKALSVPD*IYGSTERSINVGTSVCFKSVDDDLSS 161
T F +CW N+ V +YGS I+ GT K V +L S
Sbjct: 909 TDFTVCWWYNNYGSGYQVLAEVYGSPSNFISFGTDASNKYVKSELGS 955
>SB_59382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 370 IIKNVAEKNYGSDEATIFSL-AFGEDADPKLLRKLSLRNNGFARHIYGPQTRRCSCATST 546
++ N EKN D+AT+ SL A D L +++S + + + PQ + AT
Sbjct: 15 LMVNQQEKNIAEDDATLRSLEAKVPSTDLDLHKRISAASKRSTKRPHRPQQKMPDLATVQ 74
Query: 547 DRSPRLCCHMSNLSTHR 597
++S + C L +
Sbjct: 75 EKSSKRSCRRKLLKNDK 91
>SB_71| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
SM VP ASMLVPP+AS L
Sbjct: 57 SMLVPPYASMLVPPYASML 75
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS+L
Sbjct: 238 LYASMLVPLYASILVPPYASTL 259
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP ASMLVPP+AS L
Sbjct: 118 LYASILVPLYASMLVPPYASML 139
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS L
Sbjct: 262 LYASMLVPPYASILVPPYASIL 283
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L SM VP AS+LVPP+AS L
Sbjct: 94 LYASMLVPLYASILVPPYASIL 115
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LIRSMAVPSAASMLVPPFASSL 181
L S+ VP ASMLVPP+AS L
Sbjct: 174 LYASILVPLYASMLVPPYASIL 195
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
S+ VP ASMLVPP+AS L
Sbjct: 193 SILVPLYASMLVPPYASML 211
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 237 SMAVPSAASMLVPPFASSL 181
S+ VP AS+LVPP+AS+L
Sbjct: 273 SILVPPYASILVPPYASTL 291
>SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1)
Length = 409
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 433 FGEDADPKLLRKLSLRNNGFARHIYGPQTRRCSCATSTDRSP 558
F D +L L R + +YGP T C A+S+D P
Sbjct: 156 FALDEPSNVLACLETRGRPHEKVVYGPDTPICVAASSSDARP 197
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 531 LRDFYRQVSSPLLSHVKFVYAPDQVIESSVTK-TKFRTYYAGSEVVVAGQVDTATRDLE 704
++DFY ++ L SHV F P ++++ ++ K+ V D T+DLE
Sbjct: 116 VQDFYVAIAERLQSHVLFKGQPQEILDRTLDNIEKYIMTKLYRVVFCPASTDDETKDLE 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,627,103
Number of Sequences: 59808
Number of extensions: 445206
Number of successful extensions: 3334
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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