Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0950
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.42 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.8  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 414 ECKQSIFRRRAGHSRGSCRPTRRSTVGFLLKHTD 313
           +C  S  R+     +G+C+  R   VG+ LK  D
Sbjct: 61  QCSNSPLRKARYTEKGTCKMGREIEVGYDLKSPD 94


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
          1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 84 IGRVFSFEGLPIRRLH 37
          + +  SFE LP RRLH
Sbjct: 47 VSKPVSFESLPNRRLH 62


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 LHSFVHICFVGMLDLSYNLAI 82
           LH F   C++ +L L  N+A+
Sbjct: 169 LHEFYGFCYLWVLILICNIAL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,188
Number of Sequences: 336
Number of extensions: 3039
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)