Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0950
(533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 106 1e-23
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 90 9e-19
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 82 3e-16
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 69 3e-12
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 7e-12
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 62 2e-10
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 56 1e-08
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 44 8e-05
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 30 1.4
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_18864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 27 7.3
SB_27155| Best HMM Match : Dynein_heavy (HMM E-Value=1.1e-09) 27 7.3
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 27 7.3
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 119 bits (286), Expect = 2e-27
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +3
Query: 255 LASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAYTRHEPVGV 434
LASLET+D+GK + DS GD+ +S RYYAGWADK+ G +PADG YF YTRHEPVG+
Sbjct: 412 LASLETIDSGKLFSDSV-GDMQSSANCFRYYAGWADKVTGKTIPADGPYFVYTRHEPVGL 470
Query: 435 CGQIIPWNFPILMAAWKLGPALATG 509
G I PWNFP+ MA+ K+ PALA G
Sbjct: 471 VGAITPWNFPLNMASVKIAPALACG 495
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/80 (47%), Positives = 45/80 (56%)
Frame = +1
Query: 16 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 195
LFINNE+V + GK F T NP G+ I ++ FKLGS WRTMDA
Sbjct: 332 LFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAFKLGSAWRTMDA 391
Query: 196 SERGALINKLADLIERDRTY 255
S RG L+ KLA LI+RD Y
Sbjct: 392 SMRGKLLYKLAQLIDRDIAY 411
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 106 bits (255), Expect = 1e-23
Identities = 49/85 (57%), Positives = 57/85 (67%)
Frame = +3
Query: 255 LASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAYTRHEPVGV 434
LA LE+ D GK ++ D+ I RYYAGWADK+ G +PADG +F YTRHEPVGV
Sbjct: 1282 LARLESYDGGKVINEAKI-DVQGMIGCFRYYAGWADKVTGKTIPADGPFFTYTRHEPVGV 1340
Query: 435 CGQIIPWNFPILMAAWKLGPALATG 509
G I PWNFP+LM KL PALA G
Sbjct: 1341 VGAITPWNFPLLMEGLKLAPALACG 1365
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +1
Query: 160 FKLGSPWRTMDASERGALINKLADLIERDRTY 255
FKLGS WRTMDAS RG + KLADL ERD Y
Sbjct: 1250 FKLGSVWRTMDASARGHFLYKLADLCERDADY 1281
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 90.2 bits (214), Expect = 9e-19
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Frame = +3
Query: 240 KRQNLLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPA------DGKY 401
K LLA +E++DNGK + D+ ++ LRY AG+A KI G + D ++
Sbjct: 120 KNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIEGRTVQVSVPFMPDAQF 179
Query: 402 FAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATG 509
YTR E VGV G I+ WNFP+L+A WKLGPALATG
Sbjct: 180 HGYTRREAVGVVGAIVAWNFPLLLACWKLGPALATG 215
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +1
Query: 22 INNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASE 201
I ++W ++DG+T + NPA +VIA V F SPW + E
Sbjct: 48 IGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFD-DSPWSRIKPVE 106
Query: 202 RGALINKLADLIERD 246
R L+ ADLIE++
Sbjct: 107 RQKLLWNFADLIEKN 121
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 81.8 bits (193), Expect = 3e-16
Identities = 47/120 (39%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = +3
Query: 153 RCVQTWITMENNGRLREGGPYQQTSRFD*KRQNLLASLETLDNGKPYKDSYFG-DLYASI 329
+ +TW + + R R G SR KR+ +A +E DNGKP+ ++ + D A +
Sbjct: 324 KAFKTWSVLSGSERGRILG---DASRLVRKRREDIAKVEVHDNGKPFHEALWDVDNVADV 380
Query: 330 KNLRYYAGWADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATG 509
L YYAG A + G + FAYTR EP+GV G I WN+PI A WK+ PA+A G
Sbjct: 381 --LEYYAGVAPTLSGQHVQLPNGSFAYTRREPLGVVGGIGAWNYPIQTACWKIAPAIACG 438
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 261 SLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLP 386
SLETLDNGKPY DS+ DL +IK RYYAGWADKIHG +P
Sbjct: 32 SLETLDNGKPYNDSFNVDLEFTIKCYRYYAGWADKIHGKTIP 73
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 67.3 bits (157), Expect = 7e-12
Identities = 39/116 (33%), Positives = 63/116 (54%)
Frame = +3
Query: 162 QTWITMENNGRLREGGPYQQTSRFD*KRQNLLASLETLDNGKPYKDSYFGDLYASIKNLR 341
Q+W + + R R +R K L+A LE++DNGK +++ D+ ++L
Sbjct: 693 QSWSKLPGHARARH---LYSIARHVQKHARLIAVLESMDNGKSVRETRDCDIPNVARHLY 749
Query: 342 YYAGWADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATG 509
++AGWA + D + + +PVGV G I+PWNFP+++ WK+ PALA G
Sbjct: 750 HHAGWAQLM-------DTEMQGW---KPVGVVGGIVPWNFPLMLLCWKVCPALAMG 795
Score = 36.3 bits (80), Expect = 0.016
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Frame = +3
Query: 297 DSYFGDLYASIKNLRYYAGWADKIHGN--------VLPADGKYFAYT--RHEPVGVCGQI 446
D ++ ASI+ L YY +ADK GN P + ++ T HEPVGV G
Sbjct: 1239 DECKAEVDASIQRLFYYGAYADKFGGNRPVFSDKDTKPEETPFYGATIKIHEPVGVIGIA 1298
Query: 447 IPWNFPILMAAWKLGPALATG 509
P +L L PA+ G
Sbjct: 1299 CPDECSLLAFVSLLAPAIIRG 1319
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 LASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPAD--GKYFAYTRHEPV 428
+A + TL++GKP ++ LYA+ + +++ A +++G+++P++ G+ T+ EPV
Sbjct: 25 IAKIITLESGKPLLEARGEVLYAA-NYIEFFSEEAKRVYGDIIPSNNPGQKVLITK-EPV 82
Query: 429 GVCGQIIPWNFPILMAAWKLGPALATG 509
GVC I PWNFPI M K A+A G
Sbjct: 83 GVCASITPWNFPIAMLVRKASSAIACG 109
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 243 RQNLLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAY-TRH 419
R++ L ++ + GK + G+ Y S + YYA + G + TR
Sbjct: 81 RKDELGAILAREEGKTLAEGV-GETYRSGQFFHYYAAEVLRQMGETAESVRPGIEIETRR 139
Query: 420 EPVGVCGQIIPWNFPILMAAWKLGPALATG--VLW 518
EPVGV G I PWNFP AWK+ PALA G ++W
Sbjct: 140 EPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVW 174
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 44.0 bits (99), Expect = 8e-05
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 ASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW---ADKIHGNVLPADGKYFAYTRHEPV 428
A E+ D GK + D+ NLR +A N L + Y+ P
Sbjct: 89 AQAESRDQGKTVNFARNVDIPRCCLNLRMFASAIMVGSNSRANFLESQA-VVNYSLRSPK 147
Query: 429 GVCGQIIPWNFPILMAAWKLGPALATG 509
GV G I PWN P+ + ++K+ PA+A+G
Sbjct: 148 GVAGLISPWNLPLYLLSFKIAPAVASG 174
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 16 LFINNEWVKSSDGKTFKTENPANGQVIAEV 105
LFIN E+V S GKTF T NP +G V+A+V
Sbjct: 711 LFINGEFVDSHHGKTFNTINPTDGTVLAQV 740
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAYTRH-EPVG 431
L L +L+ GK + + G++ I Y G + G V P++ A PVG
Sbjct: 92 LGKLLSLEVGKIFPEGV-GEIQEYIDVCDYAVGLSRMFDGKVFPSERPGHALLEQWNPVG 150
Query: 432 VCGQIIPWNFPILMAAWKLGPALATG 509
G I +NFP+ + W ++ G
Sbjct: 151 TVGVITAFNFPVAVFGWNTAISMTCG 176
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 KRQNLLASLETLDNGKPYKDSYFGDLYAS-IKNLRYYAGWADKIHGNVLPADGKYFAYTR 416
KR + ETLD G + +A+ + N+R A I G A+G Y+
Sbjct: 90 KRSEDFSKAETLDTGTVISRANNNKEFANEVLNIRVLVDHALSIMGEST-AEGGTLCYSI 148
Query: 417 HEPVGVCGQIIPWNFPILMAAWKLGPALATG 509
+GV I W+ + L PA+A+G
Sbjct: 149 RHSLGVVAIITSWSQALPSILRHLVPAMASG 179
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = -3
Query: 216 DKGPPLGGVHCSPW*SKFERISSCLHSFVHICFVGMLDLSYNLAIGRVFSFEGLPIRRLH 37
D P + V C + I CLHSF C V L SY+ + + P +
Sbjct: 1359 DLNPHIICVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVCDTEVHKTRPFLNIR 1418
Query: 36 PLIVYEE 16
P V ++
Sbjct: 1419 PDCVLQD 1425
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 408 YTRHEPVGVCGQIIPWNFPILMAAWKLGPALATG 509
Y ++EP+GV I WN+P+ + L A+A G
Sbjct: 67 YIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGG 100
>SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = -3
Query: 396 FRRRAGHSRGSCRPTRRSTVGFLLKHTDHRNTSPCMVCRCPASP----G*LIGSVSFNQI 229
FR GH R CR +R + H + CM C P L+ SV FN+I
Sbjct: 42 FRNLTGHWRVGCRQSRMFNYVLSFQEGYHYSRKSCMFCSDLEGPFVATTDLLKSVKFNEI 101
>SB_18864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = -3
Query: 396 FRRRAGHSRGSCRPTRRSTVGFLLKHTDHRNTSPCMVCRCPASP----G*LIGSVSFNQI 229
FR GH R CR +R + H + CM C P L+ SV FN+I
Sbjct: 42 FRNLTGHWRVGCRQSRMFNYVLSFQEGYHYSRKSCMFCSDLEGPFVATTDLLKSVKFNEI 101
>SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 27.9 bits (59), Expect = 5.5
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Frame = -3
Query: 528 GFMTTVHPSPELARASKPP-SI*GSSMVLSDRTHPL--AHDECKQSIFRRRAGHSRGSCR 358
G TT HPS ++ PP + + R +P +H S R GHS R
Sbjct: 485 GISTTKHPSRDIRTTGHPPRDVRTTRRPSRSRGYPSRGSHTTKHPSRDIRTTGHSSRDVR 544
Query: 357 PTRRSTVGFLLKHTDHRNTSPCMVCRCPA 271
TR + G + T H P VC P+
Sbjct: 545 TTRHPSRG--IPTTRH----PSAVCEIPS 567
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 156 ISSCLHSFVHICFVGMLDLSYNLAI 82
I CLHSF C V L+ SY +
Sbjct: 61 IIECLHSFCRCCIVRYLETSYRCPV 85
>SB_27155| Best HMM Match : Dynein_heavy (HMM E-Value=1.1e-09)
Length = 1248
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 392 RKILCLHSS*ASGCVR-SDNTMELPYIDGGLEARASSGDG 508
R L SS + G V SDN M++PY+ L +S G G
Sbjct: 61 RCYFALLSSMSQGSVAYSDNQMDMPYLSSPLYCHSSQGIG 100
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 156 ISSCLHSFVHICFVGMLDLSYNLAI 82
I CLHSF C V L+ SY +
Sbjct: 29 IIECLHSFCRCCIVRYLETSYRCPV 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,375,989
Number of Sequences: 59808
Number of extensions: 393969
Number of successful extensions: 905
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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