Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0945
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    79   4e-17
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    66   3e-13
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    27   0.21 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   6.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.1  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 79.0 bits (186), Expect = 4e-17
 Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
 Frame = -2

Query: 570 RTIRNVRQLFQFPDLPQQRRQIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGE 391
           RT   + Q F   DL ++ R +AY  ED+GLN +++++H   PF     +    K RRGE
Sbjct: 174 RTPIEIPQDFTASDLDEEHR-VAYWREDIGLNLHHWHWHLVYPF--EGAREIVDKNRRGE 230

Query: 390 IYFFFYQQLLARYYMERLTNGLGKIPEFS-WYSPLRTGYLPPFNSFFIHLPKEAMTTSCT 214
           I+++ +QQ++AR+ +ERL NGL ++ + S W  PL   Y P  +S        A   +  
Sbjct: 231 IFYYMHQQIIARFNIERLCNGLKRVVKLSNWREPLPEAYFPKLDSLVASRTWPARPVNQV 290

Query: 213 PR 208
           PR
Sbjct: 291 PR 292



 Score = 29.5 bits (63), Expect = 0.030
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 755 YAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEV 654
           YA+ +A++ R DT +  LP+    +P  +V+ +V
Sbjct: 125 YAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQV 158


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 66.1 bits (154), Expect = 3e-13
 Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = -2

Query: 570 RTIRNVRQLFQFPDLPQQRRQIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGE 391
           RT   + + +   DL ++ R +AY  ED+G+N +++++H   PF   + +    K RRGE
Sbjct: 174 RTPIEIPRDYTASDLEEEHR-LAYFREDLGINLHHWHWHLVYPF--EAAREVVAKNRRGE 230

Query: 390 IYFFFYQQLLARYYMERLTNGLGKIPEFSWYS-PLRTGYLPPFNS 259
           ++++ +QQ++ARY  ERL N L +   F+ ++  ++  Y P  +S
Sbjct: 231 LFYYMHQQIIARYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDS 275


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 22/97 (22%), Positives = 40/97 (41%)
 Frame = -2

Query: 549 QLFQFPDLPQQRRQIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQ 370
           QL Q   +    +  A+    V  N  +  FH++  F W      A+ E+    +F FY 
Sbjct: 94  QLIQNLKVVATTKTKAWFLPFVVTNIIFVLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYA 153

Query: 369 QLLARYYMERLTNGLGKIPEFSWYSPLRTGYLPPFNS 259
           Q +  + +  +   L  + ++   + + TG L   NS
Sbjct: 154 QFIVYFLIYAVLEML--LQKYKTVTYVMTGQLKAQNS 188


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 422 LPEFHQNGKCEW 457
           L EFH+NG  EW
Sbjct: 296 LCEFHKNGIIEW 307


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 300 YSPLRTGYLPPFNS 259
           Y PLRT Y   FNS
Sbjct: 34  YGPLRTSYQHHFNS 47


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 573 FFDNSVIITYFLVKATIHHLNVV 641
           + +    I  FL+K TI H N+V
Sbjct: 147 YVERDTDIRRFLIKVTILHPNIV 169


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 181 DIYEKTFFQYLQQGHFKAFDKKIDLHSSKAVNF 83
           +I +    Q  QQ   +AF K I+  +SKA+ F
Sbjct: 46  EIPQNIIQQQPQQARRRAFVKIIEQPASKALRF 78


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 624 HHLNVVHFIFNFHV 665
           HH++  H + N HV
Sbjct: 328 HHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,404
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)