Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0934
         (303 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   2.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   2.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   6.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    19   8.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 64  PAIERSIQEWIHPVVDRSIKYALT 135
           P ++  +Q  I+P++   +  ALT
Sbjct: 550 PLLDTRLQAIIYPIIQEKLGVALT 573


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 133 TTCEQIIRKDFALDPDEVRMRTCA 204
           TT EQ++RK+  L  +++  R  A
Sbjct: 337 TTNEQLLRKELLLFAEQMGQRQVA 360


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 163 FALDPDEVRMRTCAHHMMRNLT 228
           F L  DEV +   A H+ +  T
Sbjct: 397 FHLGGDEVNLECWAQHLQKTTT 418


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 95  IHSWIDLSIAGFTNC 51
           +++WI L     TNC
Sbjct: 307 VNTWISLFCVKVTNC 321


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  SHNLIPKLP 41
           SHNL+ KLP
Sbjct: 351 SHNLLGKLP 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,749
Number of Sequences: 336
Number of extensions: 1382
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)