BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0934
(303 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription ... 135 3e-32
BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein. 135 3e-32
AL117492-1|CAB55960.1| 1100|Homo sapiens hypothetical protein pr... 135 3e-32
AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein. 135 3e-32
BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein pr... 134 4e-32
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 29 2.0
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 29 2.0
BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated prot... 29 2.0
BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 29 2.0
BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 29 2.0
AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens ... 29 2.0
AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens ... 29 2.0
AK001717-1|BAA91858.1| 297|Homo sapiens protein ( Homo sapiens ... 29 2.0
AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens ... 29 2.0
AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated prot... 29 2.0
AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated prot... 29 2.0
AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated prot... 29 2.0
U37143-1|AAC50370.2| 502|Homo sapiens cytochrome P450 monooxyge... 28 6.2
BC032594-1|AAH32594.1| 502|Homo sapiens cytochrome P450, family... 28 6.2
AY426985-1|AAQ93356.1| 502|Homo sapiens cytochrome P450, family... 28 6.2
AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens ... 28 6.2
AF272142-1|AAM44456.1| 502|Homo sapiens cytochrome P450 protein. 28 6.2
AF144566-1|AAD30164.1| 339|Homo sapiens cytochrome P450 epoxyge... 28 6.2
AB080265-1|BAB85489.1| 502|Homo sapiens cytochrome P450 2J2 pro... 28 6.2
AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein. 28 6.2
>BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription
complex, subunit 1 protein.
Length = 1551
Score = 135 bits (326), Expect = 3e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 ICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPD 180
I NP I LFQ +P LKQ V+ AIER++QE +HPVVDRSIK A+TTCEQI+RKDFALD +
Sbjct: 1374 ITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSE 1433
Query: 181 EVRMRTCAHHMMRNLTAGMAMITCR 255
E RMR AHHMMRNLTAGMAMITCR
Sbjct: 1434 ESRMRIAAHHMMRNLTAGMAMITCR 1458
>BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.
Length = 1620
Score = 135 bits (326), Expect = 3e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 ICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPD 180
I NP I LFQ +P LKQ V+ AIER++QE +HPVVDRSIK A+TTCEQI+RKDFALD +
Sbjct: 618 ITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSE 677
Query: 181 EVRMRTCAHHMMRNLTAGMAMITCR 255
E RMR AHHMMRNLTAGMAMITCR
Sbjct: 678 ESRMRIAAHHMMRNLTAGMAMITCR 702
>AL117492-1|CAB55960.1| 1100|Homo sapiens hypothetical protein
protein.
Length = 1100
Score = 135 bits (326), Expect = 3e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 ICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPD 180
I NP I LFQ +P LKQ V+ AIER++QE +HPVVDRSIK A+TTCEQI+RKDFALD +
Sbjct: 98 ITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSE 157
Query: 181 EVRMRTCAHHMMRNLTAGMAMITCR 255
E RMR AHHMMRNLTAGMAMITCR
Sbjct: 158 ESRMRIAAHHMMRNLTAGMAMITCR 182
>AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.
Length = 1835
Score = 135 bits (326), Expect = 3e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 ICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPD 180
I NP I LFQ +P LKQ V+ AIER++QE +HPVVDRSIK A+TTCEQI+RKDFALD +
Sbjct: 833 ITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSE 892
Query: 181 EVRMRTCAHHMMRNLTAGMAMITCR 255
E RMR AHHMMRNLTAGMAMITCR
Sbjct: 893 ESRMRIAAHHMMRNLTAGMAMITCR 917
>BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein
protein.
Length = 2150
Score = 134 bits (325), Expect = 4e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 ICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPD 180
I NP I LFQ +P LKQ V+ AIER++QE +HPVVDRSIK A+TTCEQI+RKDFALD +
Sbjct: 1369 ITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAVTTCEQIVRKDFALDSE 1428
Query: 181 EVRMRTCAHHMMRNLTAGMAMITCR 255
E RMR AHHMMRNLTAGMAMITCR
Sbjct: 1429 ESRMRIAAHHMMRNLTAGMAMITCR 1453
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated protein
10-7 protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 592 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 639
>BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 592 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 639
>AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens
cDNA FLJ32319 fis, clone PROST2003472. ).
Length = 494
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 267 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 314
>AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens
cDNA FLJ14655 fis, clone NT2RP2002292. ).
Length = 819
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 592 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 639
>AK001717-1|BAA91858.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ10855 fis, clone NT2RP4001524. ).
Length = 297
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 70 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 117
>AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
CYLICIN I. ).
Length = 489
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 PHIILFQNYPHLKQ-FVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIR 156
P +++ LK+ F+ + +I+EW+ P+ DRS+ AL E++++
Sbjct: 385 PAVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLP-ALKIREELLK 432
>AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated protein
protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated protein
protein.
Length = 365
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated protein
protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 262 ICSGM*SLPCRQSSCASC 209
+CSG+ S C+QSSC SC
Sbjct: 164 VCSGISSSCCQQSSCVSC 181
>U37143-1|AAC50370.2| 502|Homo sapiens cytochrome P450
monooxygenase CYP2J2 protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 243 PHQTLFSNWKKLKLFVSHMIDKHRKDW 269
>BC032594-1|AAH32594.1| 502|Homo sapiens cytochrome P450, family 2,
subfamily J, polypeptide 2 protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 243 PHQTLFSNWKKLKLFVSHMIDKHRKDW 269
>AY426985-1|AAQ93356.1| 502|Homo sapiens cytochrome P450, family 2,
subfamily J, polypeptide 2 protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 243 PHQTLFSNWKKLKLFVSHMIDKHRKDW 269
>AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ46594 fis, clone THYMU3045692. ).
Length = 368
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 37 YPHLKQFVKPAIERSIQEWIHPVVDRSI 120
YP + + P I SI +IHP + +SI
Sbjct: 143 YPSMHPSIHPFIHASIHAYIHPCIHQSI 170
>AF272142-1|AAM44456.1| 502|Homo sapiens cytochrome P450 protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 243 PHQTLFSNWKKLKLFVSHMIDKHRKDW 269
>AF144566-1|AAD30164.1| 339|Homo sapiens cytochrome P450
epoxygenase protein.
Length = 339
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 212 PHQTLFSNWKKLKLFVSHMIDKHRKDW 238
>AB080265-1|BAB85489.1| 502|Homo sapiens cytochrome P450 2J2
protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 13 PHIILFQNYPHLKQFVKPAIERSIQEW 93
PH LF N+ LK FV I++ ++W
Sbjct: 243 PHQTLFSNWKKLKLFVSHMIDKHRKDW 269
>AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein.
Length = 1778
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 249 CDHCHAGSQVAHHVMSAGTHSNF 181
CD H G+ A+H MS+G ++ +
Sbjct: 1605 CDQGHKGTTTANHTMSSGVNTRY 1627
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,933,970
Number of Sequences: 237096
Number of extensions: 812901
Number of successful extensions: 1591
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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