Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0931
(811 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.002
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 36 0.009
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 31 0.15
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 30 0.34
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 29 0.59
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 28 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 3.2
SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit S4|S... 27 3.2
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 3.2
SPAC17A5.09c |||protein phosphatase regulatory subunit Glc9|Schi... 27 3.2
SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces po... 27 3.2
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 27 4.2
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 27 4.2
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 26 5.5
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 5.5
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 26 5.5
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 26 5.5
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 26 5.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 5.5
SPAC20H4.03c |tfs1||transcription elongation factor TFIIS |Schiz... 26 5.5
SPAC664.08c |||traub transciption factor family protein |Schizos... 26 5.5
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.3
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 25 9.6
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 25 9.6
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 25 9.6
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 9.6
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 25 9.6
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/86 (23%), Positives = 44/86 (51%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S++ + + + SSS D+ + ++S S+ + DS D++ SE + +
Sbjct: 243 SESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESES-----SSE 297
Query: 420 ENPRLNGTNDSDTSQPLINGDQNTDS 497
++ + ++DSD+S +G+ NTD+
Sbjct: 298 DSDSTSSSSDSDSSSSSEDGNSNTDT 323
Score = 34.3 bits (75), Expect = 0.021
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +3
Query: 267 NQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+++ S D++ + + S+ E+S E +S S + SSED + ++ + +
Sbjct: 209 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSK 268
Query: 447 DSDTSQPLINGDQNTDSD 500
DSD+S + + ++ SD
Sbjct: 269 DSDSSSNSSDSEDDSSSD 286
Score = 33.9 bits (74), Expect = 0.027
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +3
Query: 267 NQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+++ S D++ + + S+ E+S E + +S S + SSED + ++ + +
Sbjct: 137 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 196
Query: 447 DSDTSQPLINGDQNTDSD 500
DSD+S + + + S+
Sbjct: 197 DSDSSSSSSDSESESSSE 214
Score = 33.1 bits (72), Expect = 0.048
Identities = 17/77 (22%), Positives = 38/77 (49%)
Frame = +3
Query: 267 NQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+++ S D++ + + S+ E+S E + +S S + SSED + ++ + +
Sbjct: 191 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 250
Query: 447 DSDTSQPLINGDQNTDS 497
DSD+S + + + S
Sbjct: 251 DSDSSSSSSDSESESSS 267
Score = 31.9 bits (69), Expect = 0.11
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDN--NLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLN 413
S + ++++ SSS+DN + + + S+ E+S E + +S S + SS+D N
Sbjct: 216 SDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSN 275
Query: 414 --DDENPRLNGTNDSDTSQPLINGDQNTDS 497
D E+ + ++DS++ + D + S
Sbjct: 276 SSDSEDDSSSDSSDSESESSSEDSDSTSSS 305
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPS--QQETSFESAPASPDSRKDNNSLSSEDLFVPLN 413
S + ++++ SSS+DN+ + + S + E+S E + +S S + SSE +
Sbjct: 108 SSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSS 167
Query: 414 DDENPRLNGTNDSDTSQPLINGDQNTDSD 500
+ + + D+D+S + + + S+
Sbjct: 168 SSSSESESSSEDNDSSSSSSDSESESSSE 196
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPS--QQETSFESAPASPDSRKDNNSLSSEDLFVPLN 413
S + ++++ SSS+DN+ + + S + E+S E + +S S + SSE +
Sbjct: 162 SDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSS 221
Query: 414 DDENPRLNGTNDSDTSQPLINGDQNTDSD 500
+ + + D+D+S + + + S+
Sbjct: 222 SSSSESESSSEDNDSSSSSSDSESESSSE 250
Score = 29.5 bits (63), Expect = 0.59
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 DTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDN-NSLSSEDLFVPLNDDENPRLN 437
D++ + SSS + + + +S S+ S S +DN +S SS D + +++ +
Sbjct: 143 DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSS 202
Query: 438 GTNDSDTSQPLINGDQNTDS 497
++DS++ D ++ S
Sbjct: 203 SSSDSESESSSEGSDSSSSS 222
Score = 25.8 bits (54), Expect = 7.3
Identities = 19/77 (24%), Positives = 42/77 (54%)
Frame = +3
Query: 267 NQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+++ SSS+D++ + + S E+ ES+ DS ++S SSE + ++N + ++
Sbjct: 135 SESESSSEDSDSSSSSSDSES--ESSSEGSDS--SSSSSSSES---ESSSEDNDSSSSSS 187
Query: 447 DSDTSQPLINGDQNTDS 497
DS++ + D ++ S
Sbjct: 188 DSESESSSEDSDSSSSS 204
Score = 25.8 bits (54), Expect = 7.3
Identities = 19/77 (24%), Positives = 42/77 (54%)
Frame = +3
Query: 267 NQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+++ SSS+D++ + + S E+ ES+ DS ++S SSE + ++N + ++
Sbjct: 189 SESESSSEDSDSSSSSSDSES--ESSSEGSDS--SSSSSSSES---ESSSEDNDSSSSSS 241
Query: 447 DSDTSQPLINGDQNTDS 497
DS++ + D ++ S
Sbjct: 242 DSESESSSEDSDSSSSS 258
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 35.5 bits (78), Expect = 0.009
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDL----FVP 407
SK D + R+ S D N+ S S +S+P + + KD S ++ D F+
Sbjct: 577 SKGYNSSDYDLLRTHSLDENVNSPTSISSPSSKSSPFTKTTSKDTKSATTTDERPSDFIR 636
Query: 408 LNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSR 512
LN +E+ + S T+ +++ D ++ + S+
Sbjct: 637 LNSEESVGTSSLRTSQTTSTIVSNDSSSTASIPSQ 671
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 31.5 bits (68), Expect = 0.15
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
+K P + Q + + + +NL TP+ Q+TS A+ K ++ + E + V N++
Sbjct: 373 TKQENPEEDMQIKDAEEHSNLESTPAAQQTS--EVEANNHQEKPSSLPAVEQINV--NEE 428
Query: 420 EN-PRLNGTND-----SDTSQPLINGDQNTDSDFLSR 512
N P G D + ++ LIN ++ T + +++
Sbjct: 429 NNTPETEGLEDEKEENNTAAESLINQEETTSGEAVTK 465
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 178 HQKKSENGDVANGIN-HAENNDPKTESLE 261
HQ+K + IN + ENN P+TE LE
Sbjct: 410 HQEKPSSLPAVEQINVNEENNTPETEGLE 438
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 30.3 bits (65), Expect = 0.34
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 270 QNRSSSKDNNLAKTPSQQETSFESAPASPDSR 365
+N S+KD L KT +QE++ ++PAS SR
Sbjct: 188 ENPQSTKDEPLQKTNQRQESNLATSPASTVSR 219
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 29.5 bits (63), Expect = 0.59
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 217 INHAENNDPKTESLEIQIKIGVVRKIIILQRLHRNRKLHSNQLRLLLIHVKTTIHCRVKT 396
I + ++ DPK SL+I KI +R + R R+ S ++RL L HV+ + C++ T
Sbjct: 52 IFYVDSVDPKKNSLKI--KISDIRDVQHTSRYFRS----SPKIRLSLRHVEKSWACKICT 105
Query: 397 YL 402
++
Sbjct: 106 FI 107
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 261 DTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSE--DLFVPLNDDENPRL 434
+T N +++++N LAK +Q+TS S+P +P K L + + +V D +
Sbjct: 726 NTVNNAANTENNTLAK--DKQQTSEASSPGTPRELKTTGELIEDLHEQYVHFKDKDTVLS 783
Query: 435 NGTNDSDTSQPLIN 476
+D + P++N
Sbjct: 784 LMKPPNDDTFPMLN 797
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQET---SFESAPASPDSRKDNNSLSSEDLFVPL 410
S + T+ + SSS ++ A + S + S S+ +SP S S SS P
Sbjct: 242 STSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPT 301
Query: 411 NDDENPRLNGTNDSDTSQPLINGDQNTDSDFLS 509
+ + ++ S S L + ++ S F S
Sbjct: 302 STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSS 334
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -3
Query: 314 WSLCKIIIFRTTPILICISRLSVFGSLFSAWLIPLATSPFSLFFWCNS*VGTNS---YLP 144
W++ ++I I I + L S + +W++P+ F W + GT++ Y+P
Sbjct: 2219 WAMFLLVILFYVAIWIALVALLASLSRYHSWILPILGLGFGAPRWLQTLWGTSNIGIYVP 2278
Query: 143 F 141
F
Sbjct: 2279 F 2279
>SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit
S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 273 NRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDS 452
N S+ NN TPS Q+ +S D + + +DLF ++ + P +N T +
Sbjct: 152 NCVSASSNN---TPSIQDGKQTEQVSSKDGENEKKKDNDDDLFEQTSNGKLPSINETISN 208
Query: 453 DTSQPLIN 476
+P ++
Sbjct: 209 FVPKPFMS 216
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
R + +SSSK ++ T + + +S SP N SLSSE +PL+ L
Sbjct: 698 RKGSTRKSSSKSSSAKSTAADMKPKADSKSISPGFVGGNQSLSSER--IPLDPSMRSPLQ 755
Query: 438 GTNDSDTSQ 464
+ + S+
Sbjct: 756 QQSSENESK 764
>SPAC17A5.09c |||protein phosphatase regulatory subunit
Glc9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 252 EPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSE 392
E + N + + SKD+ A T + S S DS+ DN S SS+
Sbjct: 94 EVPEINLDETDSKDDFTAGTLGDTLGTLPSTRVSKDSKDDNVSFSSD 140
>SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 113 TAGLPSKDLFMSTISFEAFSTSLFCWRNSLLSLLFL 6
TAGL + SF++F+ F W NSL + L L
Sbjct: 459 TAGLGLMHESVDVSSFKSFTRPWFSWANSLFAELIL 494
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 790 RNAQKRSQNLPIVKIFVPDTHSHHNVFKTFSQECPI 683
RN+Q SQ P++ + PD +S+H + PI
Sbjct: 200 RNSQSLSQQSPLLDVHSPD-NSNHRTMLNINNSSPI 234
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETS-FESAPASPDSRKDNNSLSSEDL-FVPLN 413
S NRE + + RSSS + Q E + F S PAS D + N + + + P N
Sbjct: 455 SNNREELPSFRKRSSSSRQSEEIASLQAENAVFSSDPASNDEKTGNKKRKKKSVSWKPDN 514
Query: 414 D 416
D
Sbjct: 515 D 515
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 324 PVAMESLQDYYLSNYSYFDLYL*ALGFWIIIFS 226
P ++ L++ +SNY ++L L WII +S
Sbjct: 221 PAVVDKLREQNISNYGIYELALGKTKRWIICWS 253
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 793 SRNAQKRSQNLPIVKIFVPD-THSHHNVFKTFSQ 695
+RN R+ +P+V+ PD ++ HH++ K ++
Sbjct: 167 NRNTSSRNTEMPLVRKDKPDFSNGHHDLIKQITE 200
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 572 ETPKPKTPVLVTRSRSNAGDIIITPSENSNARKSTT 679
E P T TRS AG+ +EN+++R+ TT
Sbjct: 250 ENPDSNTSTPTTRSEPLAGEGASIDAENASSRQETT 285
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 738 LTLIHTTMCLKRSLRNAQF--QVVDLRAFEFSDGVIMMSPAFDLLLVT 601
L +IH T CL SL N +F + +D+ A F +I + F L++T
Sbjct: 531 LGVIHMTFCLFLSLSNYRFFKRKLDIYAV-FVPSLIFLEAIFGYLVIT 577
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 542 DMGRVRIKMTETPKPKTPV 598
+ GRV + M +T KPKTP+
Sbjct: 219 EFGRVFLTMQQTEKPKTPL 237
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/73 (19%), Positives = 34/73 (46%)
Frame = +3
Query: 279 SSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDT 458
SS+ ++ + +PS T+ ++P+S S ++S SS + + + ++ S +
Sbjct: 133 SSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 192
Query: 459 SQPLINGDQNTDS 497
S + ++ S
Sbjct: 193 SSSSSSSSSSSSS 205
>SPAC20H4.03c |tfs1||transcription elongation factor TFIIS
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 246 NREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLF 401
N + ++ + R+S N + TP + T + AS D RK++ L E+LF
Sbjct: 189 NLKDKNNPKLRASVLRNEI--TPQRLSTMTSAELASEDRRKEDAKLEQENLF 238
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 5.5
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 279 SSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLN-DDENPRLNGTNDSD 455
+S N+ + +PS++E S E + +N S S N DD+ D D
Sbjct: 81 NSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMD 140
Query: 456 TSQPLINGDQ 485
+ +ING++
Sbjct: 141 RLKKIINGEK 150
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 303 AKTPSQQETSFESAPASPDSRKDNNSLSS 389
+ TPS +S S+P+S S+ ++S SS
Sbjct: 151 SSTPSSSSSSSSSSPSSSSSKSSSSSKSS 179
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 9.6
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +3
Query: 312 PSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNT 491
PS E S ++R+ SL E+ DDE N N S ++P NG N
Sbjct: 178 PSSAEADTMLNLESSENREQPTSLKEENT---QEDDEKVNGNLANISKRAEPQNNGSTNA 234
Query: 492 DS 497
S
Sbjct: 235 SS 236
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 569 TETPKPKTPVLVTRSRSNAGDIIITPSENSNARKS 673
++ PK P T SN+GD +++ +NSN S
Sbjct: 269 SKMPKHSLPSSPTPFNSNSGDSLLSRIKNSNQSSS 303
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 9.6
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 DNNLAKTPSQQETSFESAPASPDSRKDNNSLS-SEDLFVPLNDDE 422
D K P E + ++ PAS D+ S ED P +DD+
Sbjct: 921 DRESDKAPDLIELNRDAVPASADTEPGEQEASPPEDFEYPFDDDD 965
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 9.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 273 NRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLND 416
+RSS + ++ + + SF S+ + NNS+S EDL L++
Sbjct: 179 SRSSRSNRGFNRSSKKDDRSFRSS----SKKSSNNSISHEDLDKELDE 222
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 246 NREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDS 362
NR QN + + N L TP++ + +S+P P +
Sbjct: 37 NRASLPKTQNSAIPQSNALNTTPNESTSQIDSSPKIPSA 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,480,341
Number of Sequences: 5004
Number of extensions: 79970
Number of successful extensions: 388
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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