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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0931
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z73428-3|CAA97809.1|  247|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z22179-17|CAA80171.2|  691|Caenorhabditis elegans Hypothetical p...    31   0.98 
Z22173-3|CAA80127.2|  691|Caenorhabditis elegans Hypothetical pr...    31   0.98 
X96636-1|CAA65441.1|  263|Caenorhabditis elegans vab-7 protein.        31   0.98 
L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    31   1.3  
Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    30   1.7  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    30   1.7  
L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    30   1.7  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    30   2.3  
L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF003740-1|AAM15561.2|  488|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z48716-1|CAA88601.1|  482|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.        29   5.2  
AL032652-7|CAA21711.1|  277|Caenorhabditis elegans Hypothetical ...    29   5.2  
AL032652-6|CAA21710.2|  752|Caenorhabditis elegans Hypothetical ...    29   5.2  
Z82055-3|CAB04845.1|  385|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   6.9  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   6.9  
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik...    28   6.9  
Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical pr...    28   9.1  
Z78063-3|CAB01502.1|  236|Caenorhabditis elegans Hypothetical pr...    28   9.1  
U50310-1|AAA92538.1|  317|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical
           protein M162.3 protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -3

Query: 182 WCNS*VGTNSYLPFTFFSMGFSITAGLPSKDLFMSTISFEAFSTSLFCW 36
           WC +   T S       S+GF   A +  K L  ++ISF  F     CW
Sbjct: 118 WCMACAATTSLFSNRIISIGFRKYADVIEKKLAYTSISFVLFYGFYICW 166


>Z73428-3|CAA97809.1|  247|Caenorhabditis elegans Hypothetical
           protein M142.4 protein.
          Length = 247

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 315 SQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENP 428
           SQ  T   S+P S DS K  N+ S +D   P+N   +P
Sbjct: 199 SQNSTKSPSSPHSDDSSKSKNTSSDDDESKPVNFSNSP 236


>Z22179-17|CAA80171.2|  691|Caenorhabditis elegans Hypothetical
           protein F58A4.11 protein.
          Length = 691

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
 Frame = +3

Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESA--PASPDSRKDN----NSLSSEDLF 401
           S++  P D      +S   N + +P    TSFES+   ASPD+   +    N L  + + 
Sbjct: 47  SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRDASPDNLSTSSAHLNDLQEKGVV 106

Query: 402 VPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
           V   D+E  R       D  + L+  +QNT  + +S   N  Q  +QT
Sbjct: 107 V---DEELQRQLLRFHQDFKESLMENNQNT-INMMSAAFNQ-QLFKQT 149


>Z22173-3|CAA80127.2|  691|Caenorhabditis elegans Hypothetical
           protein F58A4.11 protein.
          Length = 691

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
 Frame = +3

Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESA--PASPDSRKDN----NSLSSEDLF 401
           S++  P D      +S   N + +P    TSFES+   ASPD+   +    N L  + + 
Sbjct: 47  SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRDASPDNLSTSSAHLNDLQEKGVV 106

Query: 402 VPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
           V   D+E  R       D  + L+  +QNT  + +S   N  Q  +QT
Sbjct: 107 V---DEELQRQLLRFHQDFKESLMENNQNT-INMMSAAFNQ-QLFKQT 149


>X96636-1|CAA65441.1|  263|Caenorhabditis elegans vab-7 protein.
          Length = 263

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 315 SQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENP 428
           SQ  T   S+P S DS K  N+ S +D   P+N   +P
Sbjct: 215 SQNSTKSPSSPHSDDSSKSKNTSSDDDESKPVNFSNSP 252


>L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical
           protein F44E2.7c protein.
          Length = 411

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
           + T QNR   +    A  P +  +   S PASP SR+  N  S +D +  + +DE P+
Sbjct: 3   KKTEQNRQMIQGT--AHRPDEG-SEILSVPASPMSRESRNRNSDDDYYDYVYEDEKPK 57


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 24/102 (23%), Positives = 44/102 (43%)
 Frame = +3

Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
           S N + RD   +  +++ NNL   PS+  + +E+  A  D R +    S +   +  +  
Sbjct: 91  SYNNDRRDNGGDGQNTRWNNLDAPPSRGTSKWENRGAR-DERIEQELFSGQLSGINFDKY 149

Query: 420 ENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
           E   +  T D D  QP+      +  +++   + T  Y R T
Sbjct: 150 EEIPVEATGD-DVPQPISLFSDLSLHEWIEENIKTAGYDRPT 190


>Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical
           protein R04F11.3 protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +3

Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRK---DNNSLSSEDLFVPLN 413
           K + P    +    S+D++  + PS +E S E   + P  RK   D N  + + L VP +
Sbjct: 231 KEKTPEKKPEKLIISQDSD--EFPSSREQSVEKEKSPPAKRKRVNDENKKAKKRLIVPDS 288

Query: 414 DDE 422
           DDE
Sbjct: 289 DDE 291


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 100  GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
            GKP   E +P+    NG Y LVP HE+  K     D  N ++
Sbjct: 9148 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9189


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
            protein K07E12.1a protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 100  GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
            GKP   E +P+    NG Y LVP HE+  K     D  N ++
Sbjct: 9193 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9234


>L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical
           protein F44E2.7a protein.
          Length = 471

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 303 AKTPSQQETSFE-SAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
           +K    ++TS   S PASP SR+  N  S +D +  + +DE P+
Sbjct: 74  SKRSYDRDTSCSLSVPASPMSRESRNRNSDDDYYDYVYEDEKPK 117


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
            protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 100  GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
            GKP   E +P+    NG Y LVP HE+  K     D  N ++
Sbjct: 9193 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9234


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 336 ESAPASPDSRKDNNSLSSEDLFVP-LNDDENPRLNGTNDSDTSQPLINGDQN 488
           +S P +P+  K +++ S++D  VP L DD+   + G  + D +QP  +G Q+
Sbjct: 504 QSKP-TPNFAKKSDAYSADDDRVPNLVDDDEEEIIGDEEDDVNQPGPSGSQS 554


>L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical
           protein F44E2.7d protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 303 AKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
           +K    ++TS  S PASP SR+  N  S +D +  + +DE P+
Sbjct: 74  SKRSYDRDTSC-SLPASPMSRESRNRNSDDDYYDYVYEDEKPK 115


>AF003740-1|AAM15561.2|  488|Caenorhabditis elegans Hypothetical
           protein C41D11.3 protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 554 VRIKMTETPK--PKTPVLVTRSRSNAGDIIITPSENSNARKSTT 679
           + IK+ E+P   P TPV   RSRS+  DI  + SE + +   +T
Sbjct: 401 IPIKLEESPTKYPVTPVYTRRSRSSLSDIRESTSETTGSITPST 444


>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
           protein T23F1.5 protein.
          Length = 1262

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 294 NNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFV-PLNDDENPR---LNGTNDSDTS 461
           N  + TPS+   S  S+  +P S ++    +  ++   P ND +  R   L  ++D +  
Sbjct: 325 NTESSTPSKSPGSTSSSDTTPSSNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDD 384

Query: 462 QPLINGDQNTDSDFLSRR 515
           +PL +  + TDS   S +
Sbjct: 385 EPLEDISKATDSPHSSEK 402


>Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK863.7 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 628 SSVRPTPGD*NRCFGLRCLSHLYANP 551
           S +RPTPG  NRCF  RC S  +  P
Sbjct: 72  SKLRPTPGMPNRCF--RCQSDEHRTP 95


>Z48716-1|CAA88601.1|  482|Caenorhabditis elegans Hypothetical
           protein F59B10.2 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +3

Query: 306 KTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQ 485
           KTP+  E+SFES+  S  S  ++++ S        ++ E+   +  + S TS    +  +
Sbjct: 207 KTPTPTESSFESSSDS-SSTSESSTSSESSSSASESESESKSESQVSSSKTSTSKASSSK 265

Query: 486 NTDSDFLSRR 515
              SDF S +
Sbjct: 266 AYGSDFESEK 275


>U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 628 SSVRPTPGD*NRCFGLRCLSHLYANP 551
           S +RPTPG  NRCF  RC S  +  P
Sbjct: 72  SKLRPTPGMPNRCF--RCQSDEHRTP 95


>AL032652-7|CAA21711.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.9 protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 214 GINHAENNDPKTESLEIQIKIGVVRKIIILQRLHRN 321
           GI    NN P  E LEI+   G +R II +  +HR+
Sbjct: 236 GIFRVYNNSPSIEGLEIERTDG-IRAIIFVNPMHRS 270


>AL032652-6|CAA21710.2|  752|Caenorhabditis elegans Hypothetical
           protein Y63D3A.6b protein.
          Length = 752

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +3

Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDE 422
           K R+P + N+ +   K    A+   Q++   ++APASPD+ K   +L  E      +D++
Sbjct: 519 KKRKPWEKNKPKQKKKK---AQGQGQKKFVKKNAPASPDTEK---ALKEEAKEEDDDDEK 572

Query: 423 NPRLNGTNDSDT 458
           N + + + D ++
Sbjct: 573 NSKASDSEDEES 584


>Z82055-3|CAB04845.1|  385|Caenorhabditis elegans Hypothetical
           protein T26H2.3 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 133 KKVNGKYELVPTHELHQKKSENGDVANGINHAENNDPKTESLEIQIKIGVVRKI----II 300
           K  N K E +  +  H   S   DV +GINH E    ++  L +   +G +  +     +
Sbjct: 280 KGSNRKLEYLTVYGRHGDGSNVEDVLSGINHLEIPKTRSICLHLTRNLGNIITLPGASAV 339

Query: 301 LQRLHRNRKLHSNQLRLLLIHVKT 372
             ++H  R++    +  + I++ T
Sbjct: 340 QHKIHNIRRIDDGAVATVEIYIMT 363


>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
            F01G4.1 protein.
          Length = 1474

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/68 (30%), Positives = 29/68 (42%)
 Frame = +3

Query: 258  RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
            +D  +  SSS     AK   +  TS  SAP  P  +K+     SED   P+ +DE   + 
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444

Query: 438  GTNDSDTS 461
            G      S
Sbjct: 1445 GQKKEPAS 1452


>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
            F01G4.1 protein.
          Length = 1474

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/68 (30%), Positives = 29/68 (42%)
 Frame = +3

Query: 258  RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
            +D  +  SSS     AK   +  TS  SAP  P  +K+     SED   P+ +DE   + 
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444

Query: 438  GTNDSDTS 461
            G      S
Sbjct: 1445 GQKKEPAS 1452


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 291   DNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
             + N     S+QE S E +  S    KD++SLSS D  + L   +  +  GT+
Sbjct: 11417 NKNKGLNKSEQEESQEISLKSQSKVKDSDSLSSTDKKIGLKKSDKDQKLGTS 11468


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 291   DNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
             + N     S+QE S E +  S    KD++SLSS D  + L   +  +  GT+
Sbjct: 11417 NKNKGLNKSEQEESQEISLKSQSKVKDSDSLSSTDKKIGLKKSDKDQKLGTS 11468


>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
            protein protein.
          Length = 1474

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/68 (30%), Positives = 29/68 (42%)
 Frame = +3

Query: 258  RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
            +D  +  SSS     AK   +  TS  SAP  P  +K+     SED   P+ +DE   + 
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444

Query: 438  GTNDSDTS 461
            G      S
Sbjct: 1445 GQKKEPAS 1452


>Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical
           protein C50B6.7 protein.
          Length = 713

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 411 NDDENPRLNGTNDSDTSQPLINGDQNTDSD 500
           +D   P    +ND  T+ P  NGDQ  +S+
Sbjct: 370 SDQSPPNSGASNDYATTSPTFNGDQTCNSN 399


>Z78063-3|CAB01502.1|  236|Caenorhabditis elegans Hypothetical
           protein F45D3.3 protein.
          Length = 236

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +3

Query: 300 LAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQP 467
           LA  PS Q+T      A  DS  D +         P+++     L+G N  +  QP
Sbjct: 99  LAAEPSTQKTDEIVESAESDSSSDTDYFGEASASAPVSNPALTYLSGANFDNVKQP 154


>U50310-1|AAA92538.1|  317|Caenorhabditis elegans Hypothetical
           protein ZC487.2 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = -2

Query: 252 LGFWIIIFSVVNSIGNVTIFAFLLVQFVSRYQFIFTIHFLFYGIFNNSRFTE*RF 88
           +G  I++FS++++  NVT+   ++ ++ S  + IF I F+F  I   + +T   F
Sbjct: 73  IGATILVFSLISNFLNVTVITAIINEWSSFRRQIF-IQFVFSMITAGTVYTSVNF 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,975,504
Number of Sequences: 27780
Number of extensions: 434435
Number of successful extensions: 1682
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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