BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0931
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 31 0.98
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 31 0.98
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 31 0.98
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 31 1.3
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 30 1.7
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.7
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.7
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 30 2.3
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 5.2
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 29 5.2
AL032652-7|CAA21711.1| 277|Caenorhabditis elegans Hypothetical ... 29 5.2
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 29 5.2
Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 6.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.9
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 6.9
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 28 9.1
U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical
protein M162.3 protein.
Length = 347
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 182 WCNS*VGTNSYLPFTFFSMGFSITAGLPSKDLFMSTISFEAFSTSLFCW 36
WC + T S S+GF A + K L ++ISF F CW
Sbjct: 118 WCMACAATTSLFSNRIISIGFRKYADVIEKKLAYTSISFVLFYGFYICW 166
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 315 SQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENP 428
SQ T S+P S DS K N+ S +D P+N +P
Sbjct: 199 SQNSTKSPSSPHSDDSSKSKNTSSDDDESKPVNFSNSP 236
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 31.1 bits (67), Expect = 0.98
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESA--PASPDSRKDN----NSLSSEDLF 401
S++ P D +S N + +P TSFES+ ASPD+ + N L + +
Sbjct: 47 SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRDASPDNLSTSSAHLNDLQEKGVV 106
Query: 402 VPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
V D+E R D + L+ +QNT + +S N Q +QT
Sbjct: 107 V---DEELQRQLLRFHQDFKESLMENNQNT-INMMSAAFNQ-QLFKQT 149
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 31.1 bits (67), Expect = 0.98
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESA--PASPDSRKDN----NSLSSEDLF 401
S++ P D +S N + +P TSFES+ ASPD+ + N L + +
Sbjct: 47 SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRDASPDNLSTSSAHLNDLQEKGVV 106
Query: 402 VPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
V D+E R D + L+ +QNT + +S N Q +QT
Sbjct: 107 V---DEELQRQLLRFHQDFKESLMENNQNT-INMMSAAFNQ-QLFKQT 149
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 315 SQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENP 428
SQ T S+P S DS K N+ S +D P+N +P
Sbjct: 215 SQNSTKSPSSPHSDDSSKSKNTSSDDDESKPVNFSNSP 252
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
+ T QNR + A P + + S PASP SR+ N S +D + + +DE P+
Sbjct: 3 KKTEQNRQMIQGT--AHRPDEG-SEILSVPASPMSRESRNRNSDDDYYDYVYEDEKPK 57
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S N + RD + +++ NNL PS+ + +E+ A D R + S + + +
Sbjct: 91 SYNNDRRDNGGDGQNTRWNNLDAPPSRGTSKWENRGAR-DERIEQELFSGQLSGINFDKY 149
Query: 420 ENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQT 545
E + T D D QP+ + +++ + T Y R T
Sbjct: 150 EEIPVEATGD-DVPQPISLFSDLSLHEWIEENIKTAGYDRPT 190
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRK---DNNSLSSEDLFVPLN 413
K + P + S+D++ + PS +E S E + P RK D N + + L VP +
Sbjct: 231 KEKTPEKKPEKLIISQDSD--EFPSSREQSVEKEKSPPAKRKRVNDENKKAKKRLIVPDS 288
Query: 414 DDE 422
DDE
Sbjct: 289 DDE 291
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
GKP E +P+ NG Y LVP HE+ K D N ++
Sbjct: 9148 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9189
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
GKP E +P+ NG Y LVP HE+ K D N ++
Sbjct: 9193 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9234
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 303 AKTPSQQETSFE-SAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
+K ++TS S PASP SR+ N S +D + + +DE P+
Sbjct: 74 SKRSYDRDTSCSLSVPASPMSRESRNRNSDDDYYDYVYEDEKPK 117
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 GKPAVIE-NPIEKKVNGKYELVPTHELHQKKSENGDVANGIN 222
GKP E +P+ NG Y LVP HE+ K D N ++
Sbjct: 9193 GKPLSAEGSPLPTDNNGNYVLVPAHEVTTKVLPTDDSGNVVH 9234
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 336 ESAPASPDSRKDNNSLSSEDLFVP-LNDDENPRLNGTNDSDTSQPLINGDQN 488
+S P +P+ K +++ S++D VP L DD+ + G + D +QP +G Q+
Sbjct: 504 QSKP-TPNFAKKSDAYSADDDRVPNLVDDDEEEIIGDEEDDVNQPGPSGSQS 554
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 303 AKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPR 431
+K ++TS S PASP SR+ N S +D + + +DE P+
Sbjct: 74 SKRSYDRDTSC-SLPASPMSRESRNRNSDDDYYDYVYEDEKPK 115
>AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical
protein C41D11.3 protein.
Length = 488
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 554 VRIKMTETPK--PKTPVLVTRSRSNAGDIIITPSENSNARKSTT 679
+ IK+ E+P P TPV RSRS+ DI + SE + + +T
Sbjct: 401 IPIKLEESPTKYPVTPVYTRRSRSSLSDIRESTSETTGSITPST 444
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 294 NNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFV-PLNDDENPR---LNGTNDSDTS 461
N + TPS+ S S+ +P S ++ + ++ P ND + R L ++D +
Sbjct: 325 NTESSTPSKSPGSTSSSDTTPSSNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDD 384
Query: 462 QPLINGDQNTDSDFLSRR 515
+PL + + TDS S +
Sbjct: 385 EPLEDISKATDSPHSSEK 402
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 628 SSVRPTPGD*NRCFGLRCLSHLYANP 551
S +RPTPG NRCF RC S + P
Sbjct: 72 SKLRPTPGMPNRCF--RCQSDEHRTP 95
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 306 KTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQ 485
KTP+ E+SFES+ S S ++++ S ++ E+ + + S TS + +
Sbjct: 207 KTPTPTESSFESSSDS-SSTSESSTSSESSSSASESESESKSESQVSSSKTSTSKASSSK 265
Query: 486 NTDSDFLSRR 515
SDF S +
Sbjct: 266 AYGSDFESEK 275
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 628 SSVRPTPGD*NRCFGLRCLSHLYANP 551
S +RPTPG NRCF RC S + P
Sbjct: 72 SKLRPTPGMPNRCF--RCQSDEHRTP 95
>AL032652-7|CAA21711.1| 277|Caenorhabditis elegans Hypothetical
protein Y63D3A.9 protein.
Length = 277
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 214 GINHAENNDPKTESLEIQIKIGVVRKIIILQRLHRN 321
GI NN P E LEI+ G +R II + +HR+
Sbjct: 236 GIFRVYNNSPSIEGLEIERTDG-IRAIIFVNPMHRS 270
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +3
Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDE 422
K R+P + N+ + K A+ Q++ ++APASPD+ K +L E +D++
Sbjct: 519 KKRKPWEKNKPKQKKKK---AQGQGQKKFVKKNAPASPDTEK---ALKEEAKEEDDDDEK 572
Query: 423 NPRLNGTNDSDT 458
N + + + D ++
Sbjct: 573 NSKASDSEDEES 584
>Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical
protein T26H2.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +1
Query: 133 KKVNGKYELVPTHELHQKKSENGDVANGINHAENNDPKTESLEIQIKIGVVRKI----II 300
K N K E + + H S DV +GINH E ++ L + +G + + +
Sbjct: 280 KGSNRKLEYLTVYGRHGDGSNVEDVLSGINHLEIPKTRSICLHLTRNLGNIITLPGASAV 339
Query: 301 LQRLHRNRKLHSNQLRLLLIHVKT 372
++H R++ + + I++ T
Sbjct: 340 QHKIHNIRRIDDGAVATVEIYIMT 363
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
+D + SSS AK + TS SAP P +K+ SED P+ +DE +
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444
Query: 438 GTNDSDTS 461
G S
Sbjct: 1445 GQKKEPAS 1452
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
+D + SSS AK + TS SAP P +K+ SED P+ +DE +
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444
Query: 438 GTNDSDTS 461
G S
Sbjct: 1445 GQKKEPAS 1452
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 291 DNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+ N S+QE S E + S KD++SLSS D + L + + GT+
Sbjct: 11417 NKNKGLNKSEQEESQEISLKSQSKVKDSDSLSSTDKKIGLKKSDKDQKLGTS 11468
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 291 DNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
+ N S+QE S E + S KD++SLSS D + L + + GT+
Sbjct: 11417 NKNKGLNKSEQEESQEISLKSQSKVKDSDSLSSTDKKIGLKKSDKDQKLGTS 11468
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
+D + SSS AK + TS SAP P +K+ SED P+ +DE +
Sbjct: 1391 KDEKKETSSSVKTEEAKKDDEPSTSSASAP-PPKKKKE-----SEDSEDPMEEDEEEEII 1444
Query: 438 GTNDSDTS 461
G S
Sbjct: 1445 GQKKEPAS 1452
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 411 NDDENPRLNGTNDSDTSQPLINGDQNTDSD 500
+D P +ND T+ P NGDQ +S+
Sbjct: 370 SDQSPPNSGASNDYATTSPTFNGDQTCNSN 399
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +3
Query: 300 LAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQP 467
LA PS Q+T A DS D + P+++ L+G N + QP
Sbjct: 99 LAAEPSTQKTDEIVESAESDSSSDTDYFGEASASAPVSNPALTYLSGANFDNVKQP 154
>U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical
protein ZC487.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = -2
Query: 252 LGFWIIIFSVVNSIGNVTIFAFLLVQFVSRYQFIFTIHFLFYGIFNNSRFTE*RF 88
+G I++FS++++ NVT+ ++ ++ S + IF I F+F I + +T F
Sbjct: 73 IGATILVFSLISNFLNVTVITAIINEWSSFRRQIF-IQFVFSMITAGTVYTSVNF 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,975,504
Number of Sequences: 27780
Number of extensions: 434435
Number of successful extensions: 1682
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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