Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0931
(811 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23540.1 68414.m02960 protein kinase family protein contains ... 33 0.17
At3g18810.1 68416.m02389 protein kinase family protein contains ... 33 0.22
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 32 0.39
At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein ... 32 0.39
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 32 0.52
At3g51630.1 68416.m05662 protein kinase family protein contains ... 32 0.52
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 31 0.68
At4g37740.1 68417.m05343 expressed protein identical to transcri... 31 0.68
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 31 0.90
At2g43700.1 68415.m05432 lectin protein kinase family protein co... 30 1.6
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 30 1.6
At1g10540.1 68414.m01187 xanthine/uracil permease family protein... 30 2.1
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 29 2.8
At5g55060.1 68418.m06862 expressed protein 29 2.8
At3g16630.2 68416.m02126 kinesin motor family protein similar to... 29 2.8
At3g16630.1 68416.m02125 kinesin motor family protein similar to... 29 2.8
At3g03140.1 68416.m00310 expressed protein 29 2.8
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 29 3.7
At4g15980.1 68417.m02426 pectinesterase family protein contains ... 29 4.8
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 29 4.8
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 6.4
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 28 6.4
At2g29880.1 68415.m03628 hypothetical protein 28 6.4
At1g74150.1 68414.m08588 kelch repeat-containing protein low sim... 28 6.4
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 28 8.4
At5g62890.1 68418.m07891 permease, putative similar to permease ... 28 8.4
At5g08660.1 68418.m01031 expressed protein contains Pfam domain ... 28 8.4
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 28 8.4
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 28 8.4
At2g22795.1 68415.m02704 expressed protein 28 8.4
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 306 KTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTN 446
++PS E S E+ PA P+ DNN S+DL P +P + TN
Sbjct: 101 ESPSPPEDS-ETPPAPPNESNDNNPPPSQDLQSPPPSSPSPNVGPTN 146
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDE 422
+N P T + SSS DN +P ++S S PA P D++S S P +D +
Sbjct: 8 ENSPPSPTPPSPSSS-DNQQQSSPPPSDSSSPSPPAPPPP--DDSSNGSPQ--PPSSDSQ 62
Query: 423 NPRL-NGTNDSDTSQPLINGDQNTDSD 500
+P G N++D + N D N +++
Sbjct: 63 SPPSPQGNNNNDGNNGNNNNDNNNNNN 89
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +3
Query: 261 DTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNG 440
DT+ +++ D+ ++ ++++ + + S D++ N ++ E + NG
Sbjct: 100 DTD-DKNLKADDGVSGVATEEDAVMKESVESADNKDAENPEGEQEKESKEEKLEGGKANG 158
Query: 441 TNDSDTSQPLINGDQNTDSD 500
+ DT + L+ GD+ D D
Sbjct: 159 NEEGDTEEKLVGGDKGDDVD 178
>At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein
weak similarity to Nucleoporin NUP42 (Nuclear pore
protein NUP42) (Swiss-Prot:P49686) [Saccharomyces
cerevisiae]; contains Pfam profile PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 435
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +3
Query: 255 PRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRL 434
P T + S A TP +S P +P + N+ ++ + VP+ P +
Sbjct: 334 PSTTFKPASFGPGPGFATTPQNNNIFGQSTP-TPATNTSQNNQTAFNFNVPVASFTAPAI 392
Query: 435 NGTNDSDTSQPLINGDQNTDSDFLSRRVN 521
N TN S ++ I GD S +L + N
Sbjct: 393 NTTNTSSGTELQIGGDPVDSSIWLKEKWN 421
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 52 VEKASKEMVDMNKSLLGKPAVIENPIEKKVNGKYELVPTHELHQKKSENG 201
+E+ +KEMV+ +L G E E K+ + EL E+ +KK +NG
Sbjct: 675 LEEVNKEMVERKATLAGAMEKAEKAKEGKLGVEQELRKWREVSEKKRKNG 724
>At3g51630.1 68416.m05662 protein kinase family protein contains
Pfam profile: PF00069 protein kinase domain
Length = 549
Score = 31.9 bits (69), Expect = 0.52
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 RDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
R + +DN + ++ +S S+ SP + ++NN SS D+ +P DD N N
Sbjct: 412 RHESFGHEDDEDNGDTEGRTRLFSSASSSHDSPVAVRENNDDSSNDV-IPDMDDGNRSSN 470
Query: 438 GTNDSDT--SQPLINGDQNTDSDFLSRRVNTCQYIR 539
+S T P I+ DQN RRV Q +R
Sbjct: 471 RLLNSSTYHYSPAIDDDQNQQQ---RRRVRLQQKMR 503
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
SK EP + + SSS++ N K +E ES+ + K+ SSE N +
Sbjct: 367 SKEEEPENKEKEASSSQEENEIKETEIKEKE-ESSSQEGNENKETEKKSSESQRKE-NTN 424
Query: 420 ENPRLNGTNDSDTSQPLINGDQNTD 494
++ +D+S +Q TD
Sbjct: 425 SEKKIEQVESTDSSNTQKGDEQKTD 449
>At4g37740.1 68417.m05343 expressed protein identical to
transcription activator GRL2 [Arabidopsis thaliana]
GI:21539882 (unpublished); supporting cDNA
gi|21539881|gb|AY102635.1|
Length = 535
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S N+E N N +S + L +Q S A +SP S +NN+ + PL
Sbjct: 386 SSNQEKHSGNHNHNSWPEE-LTSDWTQLSMSIPIASSSPSSTHNNNNAQEKTTLSPLRLS 444
Query: 420 ENPRLNGTNDSDTSQPLI 473
L+ D T +P +
Sbjct: 445 RELDLSIQTDETTIEPTV 462
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S + D+N S D + S++ ++ +S S D+NS SS+ N
Sbjct: 1112 SLKKNEGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSK 1171
Query: 420 ENPRLNGTNDSDTSQPLINGDQNTDS 497
+ + +G ++S +S+ +GD N+ S
Sbjct: 1172 SSKKSDGDSNSKSSKK-SDGDSNSKS 1196
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S + D+N S D + S++ ++ +S S D+NS SS+ N
Sbjct: 1136 SSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSK 1195
Query: 420 ENPRLNGTNDSDTSQPLINGDQNTDS 497
+ + +G + S SQ +GD N+ S
Sbjct: 1196 SSKKSDGDSCS-KSQKKSDGDTNSKS 1220
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDD 419
S + D+N S D + S++ ++ +S S D+NS SS+ N
Sbjct: 1124 SSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSK 1183
Query: 420 ENPRLNGTNDSDTSQ 464
+ + +G ++S +S+
Sbjct: 1184 SSKKSDGDSNSKSSK 1198
>At2g43700.1 68415.m05432 lectin protein kinase family protein
contains pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 658
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 193 ENGDVANGINHAENNDPKTESLEIQIKIGVV 285
ENGD+ +N ++ E LE+ +K+GV+
Sbjct: 556 ENGDILEAVNDGIRHEDNREQLELVLKLGVL 586
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = +3
Query: 243 KNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDE 422
K EP R S D + + E + + + +D N ED NDDE
Sbjct: 138 KQEEPSTQKGARKSKIDEETKRNDEETEND-NTEEENGNDEEDENGNDEED----ENDDE 192
Query: 423 NPRLNGT---NDSDTSQPLINGDQNTDSD 500
N NG ND + ++ N ++N D
Sbjct: 193 NTEENGNDEENDDENTEENGNDEENEKED 221
>At1g10540.1 68414.m01187 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 539
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = -3
Query: 272 LICISRLSVFGSLFSAWLIPLATSPFSLFFWCNS*VGTNSYLPF-------TFFSMGFSI 114
+I S L FG++F++ P+ + + LFF G S + F T F +GFSI
Sbjct: 381 MIFFSILGKFGAIFASIPAPIVAALYCLFFSYVG-AGGLSLIQFCNLNSFRTKFILGFSI 439
Query: 113 TAGLPSKDLFMSTISFEAFS--TSLFCWRNSLLSLLF 9
GL F + E + + W N+++++ F
Sbjct: 440 FMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPF 476
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 121 NPIEKKVNGKYELVPTHELHQKKSENGDVANGINHAENNDPKTESLEIQIK 273
+P E +NGK + H +H+ K + V + + +DP SLE Q+K
Sbjct: 235 SPSEHTINGKRFALEEHLVHESKDKRYAVVAFLYNLGASDPFLFSLEKQLK 285
>At5g55060.1 68418.m06862 expressed protein
Length = 645
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +3
Query: 339 SAPASPDSRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRV 518
S +SP + SLS+ V L + E+ + D D LIN N DS FLSR++
Sbjct: 129 SGSSSPVRERGGLSLSAVKSLV-LGEKEDKLGFDSGDEDKLVSLINALFNVDSGFLSRKI 187
>At3g16630.2 68416.m02126 kinesin motor family protein similar to
mitotic centromere-associated kinesin GB:AAC27660 from
[Homo sapiens]; contains Pfam profile PF00225: Kinesin
motor domain
Length = 794
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 273 NRSSSKDNNLAKTPSQ-QETSFESAPASPDSRKDNNSLSSEDLFV---PLNDDENPR 431
N+ +D NLA Q Q+T E P S K+NNS++ + V PLN E +
Sbjct: 154 NKEFEEDYNLAANRQQRQQTEAEPLGLLPKSDKENNSVAKIKVVVRKRPLNKKETAK 210
>At3g16630.1 68416.m02125 kinesin motor family protein similar to
mitotic centromere-associated kinesin GB:AAC27660 from
[Homo sapiens]; contains Pfam profile PF00225: Kinesin
motor domain
Length = 794
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 273 NRSSSKDNNLAKTPSQ-QETSFESAPASPDSRKDNNSLSSEDLFV---PLNDDENPR 431
N+ +D NLA Q Q+T E P S K+NNS++ + V PLN E +
Sbjct: 154 NKEFEEDYNLAANRQQRQQTEAEPLGLLPKSDKENNSVAKIKVVVRKRPLNKKETAK 210
>At3g03140.1 68416.m00310 expressed protein
Length = 769
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +1
Query: 100 GKPAVIENPIEKKVNGKYELVPTHELHQKKSENGDVANGINHAENNDPKTESLEIQIKIG 279
G+ + N + +G+ E + E H + S +GD + + NN+ T S Q K G
Sbjct: 335 GRHSERRNTFSRHTSGEDESTSSEEDHYESSISGDSSYLYSQNPNNEASTVS-NWQHK-G 392
Query: 280 VVRKIIILQRLHRNRKLHSNQL 345
+ +R R RKLH N+L
Sbjct: 393 KRNFRTLPRRSARKRKLHRNRL 414
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 372 NNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNTDSD 500
+ +L SED ++DD+ R G + + +P N D++ D D
Sbjct: 489 DETLLSEDEDDDVDDDDEERPEGADGEEVQKPEANEDEDEDED 531
>At4g15980.1 68417.m02426 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 701
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 360 SRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRR 515
S +D + SS+D P N+D + T DS +QP+ + +N SD + R
Sbjct: 227 SSRDESVGSSQDS--PPNEDSSDDSPSTVDSSENQPVDSSSENQSSDSSNNR 276
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +3
Query: 273 NRSSSKDNNLAKT-----PSQQETSFESAPASPDSRKDNNSLSSEDLFVPLNDDENPRLN 437
N S +DN+ A T P ++ET+ + + +++ ++ +V L+DDE+ N
Sbjct: 631 NLSDDEDNDTAPTEKESQPQKEETTEVPKEENVEEHDEHDETEDQEAYVILSDDED---N 687
Query: 438 GTNDSD-TSQP 467
GT ++ SQP
Sbjct: 688 GTAPTEKESQP 698
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 KNREPRDTNQNRSSSKDNNLAKT-PSQQETSFESAP-ASPDSRKDNNSLSSEDLFVPLND 416
K ++P T + S D K P+ + + S P A +K+NNSL +
Sbjct: 26 KPKQPLSTASSEDGSSDQKPEKPLPNYLKPTISSRPDAGKLLKKNNNSLDDNQKLLRRRS 85
Query: 417 DENPRLNGTNDSDTSQPLINGDQN 488
+ P + T+ S ++ P I N
Sbjct: 86 FDRPPSSLTSPSTSASPRIQKSLN 109
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 360 SRKDNNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRR 515
S ++ +SE L ++ E+ TND D + N D+++DSD S R
Sbjct: 498 SSSSSSPQASETLLESTSEHEDMEQGDTNDDDDE--MYNSDEDSDSDSSSSR 547
>At2g29880.1 68415.m03628 hypothetical protein
Length = 308
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 154 ELVPTHELHQKKSENGDVANGINHAENNDPKTESLEIQIKIGVVRKIIILQRLHRNRK 327
E +PT + K + NGD ++ INH E+++ K S I + ++ +I QR R+++
Sbjct: 194 EKLPTRK-RSKTNRNGDRSDSINHGESSE-KVLSEMIGVGTNIIN--LIQQREERHQR 247
>At1g74150.1 68414.m08588 kelch repeat-containing protein low
similarity to rngB protein, Dictyostelium discoideum,
PIR:S68824; contains Pfam profile PF01344: Kelch motif
Length = 552
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 327 TSFESAPASPDSRKDNNSLSSEDLFVPLND--DENPRLNGTNDSDTSQPLINGDQNTDSD 500
+S ++ P P + S D P+ D D N + GT++++T+ I+ S
Sbjct: 451 SSQQAGPTDPSDDTNKKVADSNDTDTPMIDTVDANVNMEGTHEAETAAVTIDAKDQDASQ 510
Query: 501 FLSRRVNT 524
VNT
Sbjct: 511 LDKGIVNT 518
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 SKNREPRDTN--QNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSEDLFVPLN 413
+ + E DTN Q + ++DN L + Q+ FES DN S D +
Sbjct: 160 NSDEENPDTNEKQTKPETEDNELGEDGENQK-QFES---------DNGEKKSIDDDKKSS 209
Query: 414 DDENPRLNGTNDSDTSQPLINGDQNTD 494
DD+ G D++T N + N D
Sbjct: 210 DDDKENKTGNEDTETKTEKENTETNVD 236
>At5g62890.1 68418.m07891 permease, putative similar to permease 1
[Zea mays] GI:7844006; contains Pfam profile: PF00860
Xanthine/uracil permeases family; identical to cDNA
putative permease 1 (MQB2.21) GI:21326024
Length = 476
Score = 27.9 bits (59), Expect = 8.4
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Frame = -3
Query: 272 LICISRLSVFGSLFSAWLIPLATSPFSLFFWCNS*VGTNSYLPF-------TFFSMGFSI 114
+I S L FG++F++ P+ + + LFF G S+L F T F +GFS+
Sbjct: 374 MIFFSILGKFGAVFASIPAPIIAALYCLFF-AYVGAGGLSFLQFCNLNSFRTKFILGFSV 432
Query: 113 TAGLPSKDLFMSTISFEAFST--SLFCWRNSLLSLLFLI 3
GL F + + + + W SLLFL+
Sbjct: 433 FLGLSIPQYFNEYTAIKGYGPVHTGARWVCRTKSLLFLL 471
>At5g08660.1 68418.m01031 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 649
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 372 NNSLSSEDLFVPLNDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSRRVNTCQYIRQTWE 551
N L SE L VP+ DE ++ P ++ Q+ DS++ R C + ++ E
Sbjct: 536 NQQLISEPLSVPIVTDEEQKMLQEASKRKRTPCVSKSQDFDSEY--SRARKCDPLSKSSE 593
Query: 552 GF 557
F
Sbjct: 594 YF 595
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 589 FGLRCLSHLYANPSHVWRIYWHVFTR--RDKKSE 494
F + LS A P HVW WH+ +KK E
Sbjct: 1162 FAMLLLSDSLARPEHVWSETWHLLAEDIENKKRE 1195
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 589 FGLRCLSHLYANPSHVWRIYWHVFT 515
F + LS A P HVW WH+ +
Sbjct: 830 FSMMLLSDSLARPEHVWSETWHLLS 854
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 240 SKNREPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLSSE 392
+KN E T + SS D NL + T E+ P S + N S+++E
Sbjct: 685 NKNGETEVTQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNG-GSNESVAAE 734
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,186
Number of Sequences: 28952
Number of extensions: 398443
Number of successful extensions: 1470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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