BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0922
(764 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 25 0.88
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 25 0.88
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 24 1.5
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 24 1.5
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 24 1.5
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 4.7
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 4.7
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 22 4.7
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 22 4.7
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 22 4.7
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 22 4.7
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 6.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 8.2
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 8.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.2
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 8.2
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 8.2
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 24.6 bits (51), Expect = 0.88
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 395 LSVDRYQINPPIEKFLYNKTDWTKYNELSLTAFSNF 502
+S Y P LYN + + +NE S + F N+
Sbjct: 31 ISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 24.6 bits (51), Expect = 0.88
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 395 LSVDRYQINPPIEKFLYNKTDWTKYNELSLTAFSNF 502
+S Y P LYN + + +NE S + F N+
Sbjct: 31 ISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 174 MTTKSRGHQLYDLIDEFDLCVLNNGSFLLLIILTE-IHRLLMSVFVVLQSLHY 329
+TT ++ +Q L++ L NN SF++ +L + IH VF +L + +
Sbjct: 77 LTTITKRNQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 129
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 174 MTTKSRGHQLYDLIDEFDLCVLNNGSFLLLIILTE-IHRLLMSVFVVLQSLHY 329
+TT ++ +Q L++ L NN SF++ +L + IH VF +L + +
Sbjct: 77 LTTITKRNQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 129
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 174 MTTKSRGHQLYDLIDEFDLCVLNNGSFLLLIILTE-IHRLLMSVFVVLQSLHY 329
+TT ++ +Q L++ L NN SF++ +L + IH VF +L + +
Sbjct: 397 LTTITKRNQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 449
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNII 107
+ + CVY + SF I K NII
Sbjct: 332 MILYCVYTTATYDSFMIYKTTNII 355
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNII 107
+ + CVY + SF I K NII
Sbjct: 57 MILYCVYTTATYDSFMIYKTTNII 80
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 479 SLTAFSNFEVIMRIHYSHMTNLSKGLIH 562
++T F +HY ++ L+KGL H
Sbjct: 180 NVTIFGESAGAAAVHYLVLSPLAKGLFH 207
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 479 SLTAFSNFEVIMRIHYSHMTNLSKGLIH 562
++T F +HY ++ L+KGL H
Sbjct: 182 NVTIFGESAGAAAVHYLVLSPLAKGLFH 209
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 479 SLTAFSNFEVIMRIHYSHMTNLSKGLIH 562
++T F +HY ++ L+KGL H
Sbjct: 180 NVTIFGESAGAAAVHYLVLSPLAKGLFH 207
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 479 SLTAFSNFEVIMRIHYSHMTNLSKGLIH 562
++T F +HY ++ L+KGL H
Sbjct: 182 NVTIFGESAGAAAVHYLVLSPLAKGLFH 209
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 364 APHRIIMHP 338
+PHRI MHP
Sbjct: 97 SPHRIYMHP 105
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 191 PTFRGHTPKCHMV 153
PTF P CHMV
Sbjct: 369 PTFDESLPGCHMV 381
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 191 PTFRGHTPKCHMV 153
PTF P CHMV
Sbjct: 376 PTFDESLPGCHMV 388
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/31 (25%), Positives = 12/31 (38%)
Frame = +1
Query: 622 APWWSDTCEQSVIKTYEALKLYRRHPTIDNY 714
+PWW+ T + T PT N+
Sbjct: 1049 SPWWTTTTTRRTTTTRPTTTSTTTRPTTTNW 1079
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 688 RRHPTIDNYINYK 726
+ HP +NYIN++
Sbjct: 363 KNHPNSENYINHQ 375
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 688 RRHPTIDNYINYK 726
+ HP +NYIN++
Sbjct: 311 KNHPNSENYINHQ 323
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,962
Number of Sequences: 336
Number of extensions: 4046
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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