Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0922
(764 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 43 5e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 40 0.004
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.004
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 40 0.005
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 38 0.011
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 38 0.020
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 36 0.061
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 36 0.080
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 34 0.25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 34 0.25
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 34 0.25
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 33 0.43
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 33 0.43
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 33 0.43
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 33 0.43
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 1.3
AY119540-1|AAM50194.1| 808|Drosophila melanogaster GH24286p pro... 31 1.3
AE014134-577|AAF51130.2| 808|Drosophila melanogaster CG9663-PA ... 31 1.3
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 31 2.3
X58286-3|CAB58351.1| 193|Drosophila melanogaster gdl protein. 29 7.0
BT023358-1|AAY55774.1| 194|Drosophila melanogaster IP10311p pro... 29 7.0
AE014298-1818|AAZ52503.1| 157|Drosophila melanogaster CG33651-P... 29 7.0
AE014296-2514|AAF49633.1| 194|Drosophila melanogaster CG33756-P... 29 7.0
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.7 bits (96), Expect = 5e-04
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 290 IDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQINPPIEKFLYNKTDWTKY 469
ID+S S I +C W + D+ GS HFP +T + + R P+ K+ ++ +W ++
Sbjct: 184 IDISLISPQIAHMCSWSISDNLHGSDHFP-ITIHINTPTRPDNTLPLPKYKTDQANWKRF 242
Query: 470 NE 475
NE
Sbjct: 243 NE 244
Score = 40.3 bits (90), Expect = 0.003
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLI 215
+ I+ Y PPS F S + I+++L + GD N+ +G T +RG ++ +I
Sbjct: 101 INIVNAYIPPSQ-IFSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVI 159
Query: 216 DEFDLCVLNNGS 251
E L VLN+GS
Sbjct: 160 LENSLIVLNDGS 171
Score = 32.3 bits (70), Expect = 0.75
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 613 KPPAPWWSDTCEQSVIKTYEALKLYRRHPTIDNYINYKKLDAVKKKTI 756
K PWW+ +Q + Y+ + N I YKK +A+ KK +
Sbjct: 286 KAKVPWWNANLQQLRDQKQRLFSSYKANTNDTNLIRYKKANALFKKAV 333
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 ALSLYVSGNHLTILCVYCPPSNGSFRISK--LRNIIRDLPKPIYVAGDFNAHHVAFGCMT 179
+++L ++ T+ VYCPP F IS+ L AGD+NA H +G
Sbjct: 92 SIALQLNNGSTTLAAVYCPPR---FPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRL 148
Query: 180 TKSRGHQLYDLI 215
+G QLY+ +
Sbjct: 149 VSPKGKQLYNAL 160
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +2
Query: 290 IDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQINPPIEKFLYNKTDWTKY 469
ID++ CS + P +W + +D GS HFP +T + + + + P F + +W ++
Sbjct: 180 IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFPTTNPQKFYRPF--FKLKEANWEQF 237
Query: 470 NELS 481
N L+
Sbjct: 238 NALT 241
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLI 215
L I Y P+ + L N P + GDFN H +G TT RG + I
Sbjct: 97 LNIFSTYISPTK-NITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFI 155
Query: 216 DEFDLCVLNNGS 251
D L +LN+ S
Sbjct: 156 DNMHLILLNDKS 167
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 625 PWWSDTCEQSVIKTYEALKLYRRHPTIDNYINYKKLDAV 741
PWW+ +Q + A K R T+DN ++Y++ +A+
Sbjct: 286 PWWNKHLDQLRKEKQLAWKKLNRTITVDNILDYRRKNAI 324
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 ALSLYVSGNHLTILCVYCPPSNGSFRISK--LRNIIRDLPKPIYVAGDFNAHHVAFGCMT 179
+++L ++ T+ VYCPP F IS+ L AGD+NA H +G
Sbjct: 92 SIALQLNNGSTTLAAVYCPPR---FPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRL 148
Query: 180 TKSRGHQLYDLI 215
+G QLY+ +
Sbjct: 149 VTPKGKQLYNAL 160
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 38.3 bits (85), Expect = 0.011
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLI 215
LT+ VYCPP L + + L AGD+NA H +G +G QLY I
Sbjct: 103 LTLAAVYCPPRFTVLEAQFL-DFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTI 161
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 51 VYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLI 215
VYCPP ++ + ++I+ + VAGD+NA H +G + RG L +L+
Sbjct: 108 VYCPP-RFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLV 161
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 35.9 bits (79), Expect = 0.061
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKP------IYVAGDFNAHHVAFGCMTTKSRGH 197
+ I VYCPPS S+ +++ K + + GD+NA H +GC+ RG
Sbjct: 125 IVIASVYCPPSL-SWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGA 183
Query: 198 QLYDLI 215
LYD I
Sbjct: 184 ALYDAI 189
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 35.5 bits (78), Expect = 0.080
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 54 YCPPSNGSFRISK-LRNIIRDLP--KPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLIDEF 224
Y PPS+ + L ++ +P + GD NA +G + +RG + D ++
Sbjct: 93 YAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTRGRAVIDAMNLL 152
Query: 225 DLCVLNNG 248
DL +LN+G
Sbjct: 153 DLVLLNDG 160
Score = 28.7 bits (61), Expect = 9.2
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 254 PTINYPNRNPSAIDVSFCSAPITPLCEWWVHDDSMGSYH 370
PT N +R S IDV+F S + W VH+D S H
Sbjct: 163 PTFNN-DRGTSFIDVTFVSRVLVAGSNWMVHEDITLSDH 200
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 15 LYVSGNHLTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 194
L S +T+ VY PP+ + + +++ L GD+NA H +G + RG
Sbjct: 97 LQTSVGTVTVAAVYLPPAE-RWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155
Query: 195 HQLYDLIDEFDLCVLNNG 248
L ++I VL G
Sbjct: 156 KMLQEVIAHGQYQVLATG 173
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 15 LYVSGNHLTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRG 194
L S +T+ VY PP+ + + +++ L GD+NA H +G + RG
Sbjct: 97 LQTSVGTVTVAAVYLPPAE-RWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRG 155
Query: 195 HQLYDLIDEFDLCVLNNG 248
L ++I VL G
Sbjct: 156 KMLQEVIAHGQYQVLATG 173
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPIYVAGDFNAHHVAFGCMTTKSRGHQLYDLI 215
L +YC PS +IIR + V GD+NA H +G RG +L + +
Sbjct: 104 LQFSAIYCSPST-RIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEAL 162
Query: 216 DEFDLCVLNNGS 251
+L GS
Sbjct: 163 SVTGAKILATGS 174
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRGH 197
+ I VYCPPS S+ +++ K + + GD+NA H +GC RG
Sbjct: 113 IVIASVYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGT 171
Query: 198 QLYDLI 215
LY+ +
Sbjct: 172 ALYEAV 177
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRGH 197
+ I VYCPPS S+ +++ K + + GD+NA H +GC RG
Sbjct: 113 IVIASVYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGT 171
Query: 198 QLYDLI 215
LY+ +
Sbjct: 172 ALYEAV 177
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRGH 197
+ I VYCPPS S+ +++ K + + GD+NA H +GC RG
Sbjct: 75 IVIASVYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGT 133
Query: 198 QLYDLI 215
LY+ +
Sbjct: 134 ALYEAV 139
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 36 LTILCVYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRGH 197
+ I VYCPPS S+ +++ K + + GD+NA H +GC RG
Sbjct: 113 IVIASVYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGT 171
Query: 198 QLYDLI 215
LY+ +
Sbjct: 172 ALYEAV 177
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 51 VYCPPSNGSFRISKLRNIIRDLPKPI------YVAGDFNAHHVAFGCMTTKSRGHQLYDL 212
VYCPPS S+ +++ K + + GD+NA H +GC RG LY+
Sbjct: 2 VYCPPSL-SWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEA 60
Query: 213 I 215
+
Sbjct: 61 V 61
>AY119540-1|AAM50194.1| 808|Drosophila melanogaster GH24286p
protein.
Length = 808
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = +3
Query: 309 VLQSLHYANGG---CMMILWGAIIFLRLLVFY 395
+L+SL ANG ++ L+G ++FLR+L FY
Sbjct: 767 ILKSLDMANGNYTLALIFLFGVLVFLRILAFY 798
>AE014134-577|AAF51130.2| 808|Drosophila melanogaster CG9663-PA
protein.
Length = 808
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = +3
Query: 309 VLQSLHYANGG---CMMILWGAIIFLRLLVFY 395
+L+SL ANG ++ L+G ++FLR+L FY
Sbjct: 767 ILKSLDMANGNYTLALIFLFGVLVFLRILAFY 798
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +3
Query: 36 LTILCVYCPPSNG--SFRISKLRNIIRDL---PKPIYVAGDFNAHHVAFGCMTTKSRGHQ 200
+ I VYCPPS + + N + GD+NA H +GC RG
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 201 LYDLI 215
LY+ +
Sbjct: 173 LYEAV 177
>X58286-3|CAB58351.1| 193|Drosophila melanogaster gdl protein.
Length = 193
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 204 YDLIDEFDLCVLNNGSFLLLIILTEI 281
YDL+ E CVLN+G F+++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
>BT023358-1|AAY55774.1| 194|Drosophila melanogaster IP10311p
protein.
Length = 194
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 204 YDLIDEFDLCVLNNGSFLLLIILTEI 281
YDL+ E CVLN+G F+++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
>AE014298-1818|AAZ52503.1| 157|Drosophila melanogaster CG33651-PA
protein.
Length = 157
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 231 CVLNNGSFLLLIILTEIHRLLMSVFVVLQSLHYANGGCMMI 353
C+L S ++LI++ + ++ + ++L+ H+ G MMI
Sbjct: 20 CILRPASSMMLIMIMIMIMTMIIMMIILKRFHWHKSGSMMI 60
>AE014296-2514|AAF49633.1| 194|Drosophila melanogaster CG33756-PA,
isoform A protein.
Length = 194
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 204 YDLIDEFDLCVLNNGSFLLLIILTEI 281
YDL+ E CVLN+G F+++ L E+
Sbjct: 57 YDLLTELANCVLNDGIFVIVKALMEL 82
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,020,436
Number of Sequences: 53049
Number of extensions: 681755
Number of successful extensions: 1802
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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