Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0922
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    35   0.055
Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    31   0.90 
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49936-5|CAE47467.1|  801|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z29117-7|CAA82379.1|  159|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and inte...    29   2.7  
AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and inte...    29   2.7  
AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    28   6.3  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
 Frame = +3

Query: 51  VYCPPSNGSFRISKLR----NIIRDLPKPIYVAGDFNAHHVAFGCMTTK-SRGHQLYDLI 215
           VY PP + S   ++L     NI +   K I ++GD NAHH A+    ++ +RG +L +LI
Sbjct: 6   VYVPPRSSSSNHARLMTDFSNIFQTKSKSI-ISGDVNAHHSAWHSEGSEDTRGRELAELI 64

Query: 216 D-EFDLCVLN 242
           D   DL + N
Sbjct: 65  DLHPDLIIQN 74


>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 362 SYHFPTLTRVLLSVDRYQINPPIEK-FLYNKTDWTKYNELSLTAFSNFEVIMRIHYSHMT 538
           +Y  P + ++L ++ R    PPI+K  L N     KY  L +  F+N   I+  H++  T
Sbjct: 95  NYLHPVVLKILATLTRSYSIPPIKKCLLLNFVKQQKYCILQMLYFNNVSNILCNHFTPST 154

Query: 539 NL 544
           ++
Sbjct: 155 SI 156


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
            F07A11.4 protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 607  RCKPPAPWWSDTCEQSVIKTYEALKLYRRHPTI 705
            R KP   W+  TC+++V  T + L+LYR  P +
Sbjct: 922  RLKPEESWYCSTCKENVEAT-KKLQLYRLPPVL 953


>Z49936-5|CAE47467.1|  801|Caenorhabditis elegans Hypothetical
           protein F13B10.1e protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 578 CQSLSKQITIVANLQHLGGVTHVNRVLLKLMKL*NYTEDIQPLIITLI 721
           C  + ++ T  ANL+++   ++  ++++  MKL N T D Q L ++LI
Sbjct: 163 CGKVLEECTSSANLEYIVNKSYTKKIMIVAMKL-NKTPDQQRLSLSLI 209


>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
           protein F13B10.1c protein.
          Length = 1000

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 578 CQSLSKQITIVANLQHLGGVTHVNRVLLKLMKL*NYTEDIQPLIITLI 721
           C  + ++ T  ANL+++   ++  ++++  MKL N T D Q L ++LI
Sbjct: 346 CGKVLEECTSSANLEYIVNKSYTKKIMIVAMKL-NKTPDQQRLSLSLI 392


>Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical
           protein F13B10.1a protein.
          Length = 930

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 578 CQSLSKQITIVANLQHLGGVTHVNRVLLKLMKL*NYTEDIQPLIITLI 721
           C  + ++ T  ANL+++   ++  ++++  MKL N T D Q L ++LI
Sbjct: 292 CGKVLEECTSSANLEYIVNKSYTKKIMIVAMKL-NKTPDQQRLSLSLI 338


>Z29117-7|CAA82379.1|  159|Caenorhabditis elegans Hypothetical
           protein C48B4.7 protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +3

Query: 255 LLLIILTEIHRLLMSVFVVLQSLHYANGGCMMILWGAIIFLRLLVFYC 398
           LLL+         +  +  + ++HY    C++++W A++F+  L+  C
Sbjct: 58  LLLVFTISSFVAFLGEYGTMMAIHYYVS-CILLIWPAVVFIMKLISLC 104


>AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and
           interleukin 1 receptordomain protein isoform c protein.
          Length = 984

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 578 CQSLSKQITIVANLQHLGGVTHVNRVLLKLMKL*NYTEDIQPLIITLI 721
           C  + ++ T  ANL+++   ++  ++++  MKL N T D Q L ++LI
Sbjct: 346 CGKVLEECTSSANLEYIVNKSYTKKIMIVAMKL-NKTPDQQRLSLSLI 392


>AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and
           interleukin 1 receptordomain protein isoform a protein.
          Length = 931

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 578 CQSLSKQITIVANLQHLGGVTHVNRVLLKLMKL*NYTEDIQPLIITLI 721
           C  + ++ T  ANL+++   ++  ++++  MKL N T D Q L ++LI
Sbjct: 293 CGKVLEECTSSANLEYIVNKSYTKKIMIVAMKL-NKTPDQQRLSLSLI 339


>AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical
           protein F33D4.4 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 195 DPDFSWSYTQMPHGER 148
           + DFSW+YT+ PH  R
Sbjct: 8   EEDFSWAYTEEPHASR 23


>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = +1

Query: 529 SYDEFIERLDTLKRDTVPKFVKANNYRCKPPAPWWSDTCEQSVIKTYEALKLYRRHPTID 708
           S D  +ER+ + K+  V + V   +     PA W S    +S +  ++   +Y+ +    
Sbjct: 142 SSDNHVERIVSRKKADVDRIVSRFSIHLSNPAFWMSQDRSRSFLANFKPANVYKLYLEST 201

Query: 709 NYINYK 726
           N  N +
Sbjct: 202 NLENIR 207


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = +1

Query: 529 SYDEFIERLDTLKRDTVPKFVKANNYRCKPPAPWWSDTCEQSVIKTYEALKLYRRHPTID 708
           S D  +ER+ + K+  V + V   +     PA W S    +S +  ++   +Y+ +    
Sbjct: 142 SSDNHVERIVSRKKADVDRIVSRFSIHLSNPAFWMSQDRSRSFLANFKPANVYKLYLEST 201

Query: 709 NYINYK 726
           N  N +
Sbjct: 202 NLENIR 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,098,641
Number of Sequences: 27780
Number of extensions: 362802
Number of successful extensions: 983
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)