Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0922
         (764 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transfera...    35   0.068
At3g61730.1 68416.m06921 hypothetical protein                          30   1.5  
At2g46850.1 68415.m05846 expressed protein                             29   3.4  
At1g19770.1 68414.m02471 purine permease-related low similarity ...    29   3.4  
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa...    29   4.5  
At3g62500.1 68416.m07022 expressed protein hypothetical proteins...    28   5.9  
At3g62590.1 68416.m07031 lipase class 3 family protein contains ...    28   7.8  
At1g15320.1 68414.m01833 hypothetical protein                          28   7.8  

>At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 453

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 514 ENPLQSYDEFIERLDTLKRDTVPKFVKANNYRCKPP 621
           E PLQ  D+++ER++T  ++T+PK V+       PP
Sbjct: 68  EEPLQDLDDYMERVETSIKNTLPKLVEDMKLSGNPP 103


>At3g61730.1 68416.m06921 hypothetical protein
          Length = 354

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 433 FNGRINLVSINGQ*NTSKRRKMIAPHRIIMH 341
           ++G +NL S  G+ N S+ + +IAPH + +H
Sbjct: 290 YSGILNLKSWTGESNDSQPKAVIAPHAVAVH 320


>At2g46850.1 68415.m05846 expressed protein 
          Length = 633

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
 Frame = +2

Query: 443 YNKTDWTKYNEL--SLTAFSNFEVIMR-----IHYSHMTNLSKGLIHLRGILCQSLSKQI 601
           YNKT    Y EL  +   F + + + +     I+  ++TN ++ ++H   +LC++  + +
Sbjct: 337 YNKTRLFTYRELEEATKGFQDSQKLTQGKTGTIYSGNLTNGTRVIVHK--VLCENQIEFM 394

Query: 602 TIVANLQHLGGVTHVN 649
            I + + HL  V H N
Sbjct: 395 EISSQIDHLSAVLHRN 410


>At1g19770.1 68414.m02471 purine permease-related low similarity to
           purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profile PF03151: Domain of unknown
           function, DUF250
          Length = 393

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 368 HFPTLT-RVLLSVDRYQINPPIEKFLYNKTDWTKYNE 475
           H+PT+T  ++  +    I   +E F Y+KT+ ++YNE
Sbjct: 45  HWPTITISIIFVIIGQSIAKLLENFYYDKTNRSEYNE 81


>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
           family protein / BRCT domain-containing protein contains
           Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
          Length = 714

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/73 (21%), Positives = 34/73 (46%)
 Frame = +1

Query: 517 NPLQSYDEFIERLDTLKRDTVPKFVKANNYRCKPPAPWWSDTCEQSVIKTYEALKLYRRH 696
           NP       +  +++L+ D    +VKA N++  P +    D+  +  I   +A++ + + 
Sbjct: 229 NPKTQDPTLLRLMESLRSDDPTDYVKAQNHQQLPKSHTEQDSKRKRDITASDAMENHLKV 288

Query: 697 PTIDNYINYKKLD 735
           P  +N +  K  D
Sbjct: 289 PKRENNLMQKSAD 301


>At3g62500.1 68416.m07022 expressed protein hypothetical proteins -
           Arabidopsis thaliana; expression supported by MPSS
          Length = 374

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 430 NGRINLVSINGQ*NTSKRRKMIAPHRIIMH 341
           +G +NL S  GQ + S+ + +IAPH + +H
Sbjct: 284 SGILNLKSWTGQPDISQPKAVIAPHAVAVH 313


>At3g62590.1 68416.m07031 lipase class 3 family protein contains
           Pfam profile PF01764: Lipase
          Length = 649

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 24/103 (23%), Positives = 43/103 (41%)
 Frame = +2

Query: 320 TPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQINPPIEKFLYNKTDWTKYNELSLTAFSN 499
           +P CEW+V DD      F    +   S+  +Q N   E   +   D   +  +   A   
Sbjct: 299 SPPCEWFVCDDDKSGTRF-FFIQGSDSLASWQANLLFEPVPFEDLDVLVHRGIYEAAKGI 357

Query: 500 FEVIMRIHYSHMTNLSKGLIHLRGILCQSLSKQITIVANLQHL 628
           +E ++   ++H+ +  K    LR     SL   ++++ NL  L
Sbjct: 358 YEQMLPEVHAHLNSRGKNRAFLR-FSGHSLGGSLSLLVNLMLL 399


>At1g15320.1 68414.m01833 hypothetical protein
          Length = 307

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +2

Query: 314 PITPLCEWWVHDDSMGSYH--FPTLTRVLLSVD--RYQINPPIEKFLYNKTDWTKY 469
           P +PLC   +H++++ S    F  + +V+      RY++   + K L N+TD  ++
Sbjct: 214 PFSPLCNTRLHEEALRSVQELFGNIHKVISKAQRLRYKVLELVMKKLLNQTDTAEF 269


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,941,620
Number of Sequences: 28952
Number of extensions: 327764
Number of successful extensions: 807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)