Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0919
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro...    29   8.0  
AF145617-1|AAD38592.1|  594|Drosophila melanogaster BcDNA.GH0352...    29   8.0  
AE014296-337|AAF47553.2|  881|Drosophila melanogaster CG2086-PB,...    29   8.0  
AE014296-336|AAF47552.1|  594|Drosophila melanogaster CG2086-PA,...    29   8.0  

>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
           protein.
          Length = 1031

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 415 ILCLAVSCVLFIDYTSYSYKISCVFLSIVHVEYCNTKNP 299
           +L    +C++F  +  Y  ++S +   I HV Y +  NP
Sbjct: 806 VLMTLFACIIFAVFIYYRRRVSNLKTEIAHVHYTHDTNP 844


>AF145617-1|AAD38592.1|  594|Drosophila melanogaster BcDNA.GH03529
           protein.
          Length = 594

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 415 ILCLAVSCVLFIDYTSYSYKISCVFLSIVHVEYCNTKNP 299
           +L    +C++F  +  Y  ++S +   I HV Y +  NP
Sbjct: 358 VLMTLFACIIFAVFIYYRRRVSNLKTEIAHVHYTHDTNP 396


>AE014296-337|AAF47553.2|  881|Drosophila melanogaster CG2086-PB,
           isoform B protein.
          Length = 881

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 415 ILCLAVSCVLFIDYTSYSYKISCVFLSIVHVEYCNTKNP 299
           +L    +C++F  +  Y  ++S +   I HV Y +  NP
Sbjct: 645 VLMTLFACIIFAVFIYYRRRVSNLKTEIAHVHYTHDTNP 683


>AE014296-336|AAF47552.1|  594|Drosophila melanogaster CG2086-PA,
           isoform A protein.
          Length = 594

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 415 ILCLAVSCVLFIDYTSYSYKISCVFLSIVHVEYCNTKNP 299
           +L    +C++F  +  Y  ++S +   I HV Y +  NP
Sbjct: 358 VLMTLFACIIFAVFIYYRRRVSNLKTEIAHVHYTHDTNP 396


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,420,326
Number of Sequences: 53049
Number of extensions: 573570
Number of successful extensions: 1127
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)