Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0919
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-25|CAL22710.1|  325|Caenorhabditis elegans Hypothetical p...    31   0.60 
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z22177-8|CAB76721.1|  136|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AL023847-3|CAA19549.2|  309|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z98866-25|CAL22710.1|  325|Caenorhabditis elegans Hypothetical
           protein Y49E10.28 protein.
          Length = 325

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 32  LNFKWLFCEVGKISLNRNSFSPFDVYRVYQKEWLILKHLIVEILGTQKNNIKK 190
           +N  W    + +IS       PF+V + Y+ EW  L  +IVE L    +N+ +
Sbjct: 99  MNTVWELKRLVQISTESWPMPPFEVEKAYEDEWNRLSGMIVEYLNDIVDNMDR 151


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 165 PNISTMRCFRINHSFWYTLYTSKGEKLFRLSE 70
           P   T+RCF+ +HSF+ T Y +    + ++ E
Sbjct: 569 PREITIRCFQESHSFYVTFYENSSGCIIKVPE 600


>Z22177-8|CAB76721.1|  136|Caenorhabditis elegans Hypothetical
           protein ZK512.9 protein.
          Length = 136

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 239 YFPYCLRFLNIQ-QIQINEMRRIFG---VTIFYMDYTKEYAGNLIR 364
           YF     F+ +Q  ++I+ ++ I G   VT+F+ DYT  Y+ +LI+
Sbjct: 2   YFSIFSVFIGLQITVEISGIQLIDGSTNVTVFHNDYTDSYSTSLIQ 47


>AL023847-3|CAA19549.2|  309|Caenorhabditis elegans Hypothetical
           protein Y57A10C.7 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 168 VPNISTMRCFRINHSFWYTLYTSKGEKLF 82
           VPN +TM CF   H   Y  Y++    +F
Sbjct: 161 VPNCATMACFVNKHFLMYVSYSNTAAGIF 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,782
Number of Sequences: 27780
Number of extensions: 344715
Number of successful extensions: 798
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)