Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0919
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    25   0.91 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    24   1.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.5  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 391 VLFIDYTSYSYKISCVFLSIVHVEYCNTKNPTHFIYLY 278
           +L +D+    ++  C F +   V +     P H+++LY
Sbjct: 78  ILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLY 115


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 275 VVYSRNVSSMENINNFFFKYLI 210
           +++ +N +S+EN N F F YL+
Sbjct: 12  LLFWQNSASLENDNEFGFSYLL 33


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 115 VPERMVNPETPHS 153
           +PER   P TPHS
Sbjct: 440 LPERWTTPTTPHS 452


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 131 LILKHLIVEILGTQKNNIKKYL 196
           +  KH++  + GTQK   K YL
Sbjct: 232 IFTKHMLDVVSGTQKKKRKIYL 253


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 131 LILKHLIVEILGTQKNNIKKYL 196
           +  KH++  + GTQK   K YL
Sbjct: 247 IFTKHMLDVVSGTQKKKRKIYL 268


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 87  AFRPSMCTGCTRKNG 131
           +++P+   GC+ KNG
Sbjct: 886 SYKPASTPGCSSKNG 900


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,531
Number of Sequences: 438
Number of extensions: 4323
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)