Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0919
         (695 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR...    28   6.8  
At3g46930.1 68416.m05093 protein kinase family protein contains ...    28   6.8  
At2g34357.1 68415.m04206 expressed protein                             28   6.8  
At1g18140.1 68414.m02250 laccase family protein / diphenol oxida...    28   6.8  
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ...    27   9.0  
At1g50290.1 68414.m05638 expressed protein                             27   9.0  

>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1188

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 424 PQNILCLAVSCVLFIDYTS-YSYKISCVFLSIVHVEYCNTKNPTHFIYLYLLYIQET*AV 248
           P+ +  +  S +L +  T  Y+    C+   +VH+   +  NP+H ++   LY+  +   
Sbjct: 59  PELLNAIETSKILIVVLTKDYASSAWCLD-ELVHIMKSHKNNPSHMVFPIFLYVDPSDIR 117

Query: 247 WK 242
           W+
Sbjct: 118 WQ 119


>At3g46930.1 68416.m05093 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 475

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 505 WTRRTLFRHTVCFKHINRSI 446
           W RR  F HTVC++ I  S+
Sbjct: 8   WIRRANFSHTVCYRMITPSL 27


>At2g34357.1 68415.m04206 expressed protein
          Length = 1280

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +2

Query: 269 IQQIQINEMRRIFGVTIFYMDYTKEYAGNLIRVASVIYKQNATDS*T*YILWLFIVEF*N 448
           ++Q  +      F   IF M  T  +    +++  +     + DS   Y LW  +  F N
Sbjct: 505 LKQYTVGGRLSFFTEAIFSMVETMSHKAQKLKLQGLPVASRSVDSLV-YSLWALLPSFCN 563

Query: 449 RPVDVFET 472
            PVD  E+
Sbjct: 564 YPVDTVES 571


>At1g18140.1 68414.m02250 laccase family protein / diphenol oxidase
           family protein similar to high-pI laccase (LAC2-1)
           GI:1621460 from [Liriodendron tulipifera]
          Length = 581

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 145 VFQD*PFFLV--HPVHIEGRKAISVKRNFSNFTKE 47
           VFQ   F  +  HP+H+ G     V R F NF  E
Sbjct: 470 VFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDPE 504


>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 513

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 65  KISLNRNSFSPFDVYRVYQKEWL 133
           K++LN N + P D+ R++ + WL
Sbjct: 241 KMTLNCNGWLPIDIARMWSRHWL 263


>At1g50290.1 68414.m05638 expressed protein
          Length = 134

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -2

Query: 487 FRHTVCFKHINRSISKFYYK*PQNILCLAVSCVLFIDYTSYSYKISC 347
           +    CF+HI  + S+FY       + + +  + F +Y+ +S+ I+C
Sbjct: 90  YERKFCFQHIGIACSRFY-------MFMELRSIKFEEYSDFSFLITC 129


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,691,002
Number of Sequences: 28952
Number of extensions: 291817
Number of successful extensions: 477
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)