Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0916
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656...    31   1.3  
09_03_0156 - 12844549-12845138,12845237-12845723                       31   1.3  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   7.0  
01_01_0205 + 1764034-1767601,1767934-1767944                           28   7.0  

>11_04_0051 +
           12863978-12864476,12864575-12864674,12865567-12865657,
           12866114-12866176,12866364-12866549,12866994-12867024,
           12867054-12867502
          Length = 472

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 538 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 690
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 66  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 116


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 538 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 690
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 62  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 112


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 535 DEKICYNYGIIKENEQFVM 591
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>01_01_0205 + 1764034-1767601,1767934-1767944
          Length = 1192

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +3

Query: 60  DAAFVEKQKKILSLFYNVNEISYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMMYKVGF 239
           D  F  K  +IL L +N+N + +  +     +   +E +   Y    +  NF M+ ++G 
Sbjct: 302 DKFFQLKNLRILDLSFNMNLLGHLPKVPTSLETLRLEGTNFSYAKRISSSNFNMLKELG- 360

Query: 240 LPKNLNSRSFTKK*GKKPSRC 302
           L   L S+ F    G   S C
Sbjct: 361 LEGKLISKDFLTSFGLIWSLC 381


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,327,643
Number of Sequences: 37544
Number of extensions: 359252
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)