Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0915
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 3.1
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 3.1
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 3.1
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 27 3.1
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 3.1
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 4.1
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 5.4
AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical ... 26 7.2
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 26 7.2
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 26 7.2
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 233 EIDAIGFFLTRASRLRRSGYNSVRCRG 313
E+D G F + + L++ GY+ V C+G
Sbjct: 597 EVDRTGTFKLKKTDLQKQGYDLVACKG 623
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 30 RPSGRWCELPSAGLCLNASKAEAS 101
RPSG WC GL L ++ EAS
Sbjct: 35 RPSGPWCVKLFVGLYLQGNRNEAS 58
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 241 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 62
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 61 DGSSHHRPL 35
S+HH P+
Sbjct: 79 SSSNHHHPV 87
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 79 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 79 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical
protein K10G9.2 protein.
Length = 240
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = -1
Query: 145 SRGSTVSISLPDSA-----RLASALEAFRHNPADGSSH 47
++G ++S+SLP SA R + +AFR++ A SH
Sbjct: 135 NKGQSLSVSLPPSARHTPHRFVNEEDAFRNSMASSDSH 172
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 79 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -1
Query: 223 NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHH 44
N R++ + R + PD G + ++ D LA+ E + A+ H
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230
Query: 43 RPLGRVHEPNV 11
R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -1
Query: 223 NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHH 44
N R++ + R + PD G + ++ D LA+ E + A+ H
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230
Query: 43 RPLGRVHEPNV 11
R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240
>AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical
protein Y48G10A.2 protein.
Length = 375
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 117 KDMLTVEPRESGGSKQCDFTSRVSHSKRETR 209
K ++ EP+E+ + D+ + ++HSK E +
Sbjct: 326 KMLIRTEPKETALRRAADYLNELTHSKTEKK 356
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 154 PPDSRGSTVSISLPDSARLASALEAFRHNPAD-GSSHHRPLGRVHEPNVR 8
PP S S V+ + P + +E+ H PAD GS PLG P R
Sbjct: 868 PPGSASSMVAHTAPGPLKSHRNVES-GHAPADFGSGSVEPLGSPPGPQTR 916
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 30 RPSGRWCELPSAGLCLNASKAEA 98
RPSG WC AG NA KA+A
Sbjct: 49 RPSGGWCMRVFAG--FNAKKADA 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,732,239
Number of Sequences: 27780
Number of extensions: 148144
Number of successful extensions: 432
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -