Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0913
(391 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 126 9e-31
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 126 9e-31
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 56 3e-09
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.012
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 27 1.0
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 26 1.8
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 26 1.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 5.5
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 5.5
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 24 7.2
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 24 7.2
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 24 7.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 9.5
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 24 9.5
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 24 9.5
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 126 bits (305), Expect = 9e-31
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQ+YR E LYEGP DDE A+GI++CD APLM+YVSKMVPTSD+GRFYAFGRVFSG
Sbjct: 344 SPKTAQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSG 403
Query: 73 KVVTGQKARIMGPNFTPG 20
V +G K RI GPN+ PG
Sbjct: 404 TVRSGLKVRIQGPNYVPG 421
Score = 58.0 bits (134), Expect = 5e-10
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
LL K+ VTIK ++ + +GKALLKVVMR +LPA +AL++MI +HL
Sbjct: 299 LLSKLEVTIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHL 342
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 126 bits (305), Expect = 9e-31
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQ+YR E LYEGP DDE A+GI++CD APLM+YVSKMVPTSD+GRFYAFGRVFSG
Sbjct: 344 SPKTAQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSG 403
Query: 73 KVVTGQKARIMGPNFTPG 20
V +G K RI GPN+ PG
Sbjct: 404 TVRSGLKVRIQGPNYVPG 421
Score = 58.0 bits (134), Expect = 5e-10
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
LL K+ VTIK ++ + +GKALLKVVMR +LPA +AL++MI +HL
Sbjct: 299 LLSKLEVTIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHL 342
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 55.6 bits (128), Expect = 3e-09
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = -1
Query: 214 YEGPHDDEAAIGI--KSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIM 41
Y GP + I S + APL+M+V+K+ T D FYAF RV+SG+V GQK +++
Sbjct: 464 YIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVL 523
Query: 40 GPNFT 26
G N++
Sbjct: 524 GENYS 528
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 33.5 bits (73), Expect = 0.012
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Frame = -1
Query: 253 SPVVAQKYRM-EMLYEGPH----DDEAAIGIKSCDP--EAPLMMYVSKMVPTSDK 110
SP+ AQ R ++L PH D + + ++SCD E P+++Y+SKMV S++
Sbjct: 353 SPINAQANRARKVLSSTPHYEMIDPDITLAMESCDASKEQPVLVYISKMVAFSER 407
Score = 31.1 bits (67), Expect = 0.063
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 115 DKGRFYAFGRVFSGKVVTGQKARIMGPNFTP 23
DK F R++SG + GQ+ + GP + P
Sbjct: 464 DKDILIGFARIYSGTISVGQEVYVYGPKYDP 494
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 27.1 bits (57), Expect = 1.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 177 IPMAASSSWGPSYNISIRYFWATTGDVNEWQSSEAEL 287
+ +A SS S NIS+R+F T N SSEA L
Sbjct: 428 LKIAEHSSLAYSNNISVRWFLGATSAQNRNASSEAIL 464
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 81 SLARLLPDKKLASWDQTLHLDSLLIQ 4
S+ + D KLA WD+TL D L Q
Sbjct: 565 SIESAMYDLKLAEWDRTLLCDGYLCQ 590
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 211 EGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSD 113
+G H EA +K CDPE L + SK T++
Sbjct: 193 DGTHLAEA---LKKCDPETTLFLIASKTFTTAE 222
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 5.5
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 60 PVTTLPEKTRPKA*KRPLSEVGTILLTYIISGASGSQLLIPMAASSSWGPSYNIS 224
P+T++ T A PL+ V + T S S + SS PSYN S
Sbjct: 358 PLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTS 412
Score = 24.6 bits (51), Expect = 5.5
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 60 PVTTLPEKTRPKA*KRPLSEVGTILLTYIISGASGSQLLIPMAASSSWGPSYNIS 224
P+T++ T A PL+ V + T S S + SS PSYN S
Sbjct: 472 PLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTS 526
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 24.6 bits (51), Expect = 5.5
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +3
Query: 252 DVNEWQSSEAELHQQATKSASQPSAKLCHLCRNP 353
+ +EW S + E H Q+ ++ K H+ P
Sbjct: 1033 EFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKP 1066
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 24.2 bits (50), Expect = 7.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +3
Query: 144 IISGASGSQLLIPMAASSSWGPSYNISIRY 233
++ + G L + M S++W P YN ++
Sbjct: 230 LLQSSFGDDLDLGMQRSATWAPGYNYPSKF 259
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 24.2 bits (50), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 125 HHLAHVHHQWGFRITALDTNGSFIIV 202
HHL + QW ITA+ G +++V
Sbjct: 153 HHLGTID-QWRSTITAMHERGMYLVV 177
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 123 RPPTKVVSTPLDAFSLARLLPDKKLASWDQTLHLDS 16
RPPT++ STP ++ SL + S H S
Sbjct: 104 RPPTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTS 139
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 246 TGDVNEWQSSEAELHQQATKSASQPSAK 329
TGDV + S E+ + + SAS S K
Sbjct: 470 TGDVKSFDSQESNIIESEPLSASNASGK 497
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 23.8 bits (49), Expect = 9.5
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 RPLSEVGTILLTYIISGASGSQLLIPMAASSSWGPSYNISIRYF---WATTGD 254
+P+S+ T++ + +S + +P A + SY++S +Y WAT D
Sbjct: 202 KPVSKESTLVDGNPVCSSSSNPQYLPEGADLTLVTSYSVSWKYSDTPWATRWD 254
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 23.8 bits (49), Expect = 9.5
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 379 EDWSHNQA*GFRQRWQSFAEGCDALLVACW*SSASDDCHSFTSPVVAQKYRMEM-LYEG- 206
+DWS+ +A F SF C AL+ A S + ++ + + +YEG
Sbjct: 252 KDWSNPEASPFFYPDSSFKNVCPALICAAGCDVLSSEAIAYNEKLTKAGVESTIKIYEGC 311
Query: 205 PH 200
PH
Sbjct: 312 PH 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,780,012
Number of Sequences: 5004
Number of extensions: 35646
Number of successful extensions: 119
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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