Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0913
(391 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 128 2e-30
04_01_0103 + 1082077-1082167,1083037-1085477 128 2e-30
02_04_0017 + 18937774-18937864,18938505-18940945 126 5e-30
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 123 4e-29
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 76 1e-14
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 63 9e-11
04_01_0099 + 1029785-1030039,1030269-1030357,1030484-1030541,103... 32 0.19
03_05_0511 + 25056018-25059107 31 0.32
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 31 0.43
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 31 0.43
06_01_1022 + 7992901-7994676 30 0.75
08_02_0311 - 15635165-15635590,15635777-15638698 28 3.0
07_03_0394 - 17633753-17636788 27 4.0
05_04_0249 - 19365952-19366020,19366097-19366211,19366450-193665... 27 4.0
02_01_0620 + 4650572-4650671,4650755-4650891,4651012-4651205,465... 27 4.0
08_01_0601 - 5268520-5271112,5272448-5272950 27 5.3
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 27 5.3
03_06_0213 - 32406047-32406742 27 5.3
02_03_0116 - 15440263-15441024,15441097-15443451 27 5.3
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 27 5.3
11_06_0584 - 25220371-25222917 27 7.0
07_03_0230 + 15526504-15526673,15526809-15526867,15527135-155271... 27 7.0
02_05_0596 + 30239186-30239567,30239642-30239742,30240680-302407... 27 7.0
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 26 9.2
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 26 9.2
03_01_0317 + 2492030-2492591,2493189-2493249,2493951-2494066,249... 26 9.2
02_05_0451 + 29123899-29123906,29124564-29124834,29125107-291252... 26 9.2
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 26 9.2
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 26 9.2
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 128 bits (309), Expect = 2e-30
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQ+YR+E LYEGP DD A I++CDPE PLM+YVSKM+P SDKGRFYAFGRVFSG
Sbjct: 338 SPAKAQRYRVENLYEGPLDDIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSG 397
Query: 73 KVVTGQKARIMGPNFTPG 20
+V TG K RIMGPN+ PG
Sbjct: 398 RVATGMKVRIMGPNYAPG 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
+L+K+GVT+K D GKAL+K VM++WLPA ALL+M+ HL
Sbjct: 297 MLQKLGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHL 336
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 128 bits (308), Expect = 2e-30
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQKYR+E LYEGP DD A I++CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG
Sbjct: 342 SPSKAQKYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSG 401
Query: 73 KVVTGQKARIMGPNFTPG 20
+V TG K RIMGPN+ PG
Sbjct: 402 RVATGMKVRIMGPNYVPG 419
Score = 53.6 bits (123), Expect = 5e-08
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
+L+K+GV +K ++ D GKAL+K VM++WLPA ALL+M+ HL
Sbjct: 297 MLQKLGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHL 340
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 126 bits (305), Expect = 5e-30
Identities = 55/78 (70%), Positives = 64/78 (82%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQ+YR+E LYEGP DD A I++CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG
Sbjct: 342 SPSKAQRYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSG 401
Query: 73 KVVTGQKARIMGPNFTPG 20
+V TG K RIMGPN+ PG
Sbjct: 402 RVATGMKVRIMGPNYVPG 419
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
+L+K+GV +K ++ + GKAL+K VM++WLPA ALL+M+ HL
Sbjct: 297 MLQKLGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHL 340
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 123 bits (297), Expect = 4e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = -1
Query: 253 SPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSG 74
SP AQ+YR++ LY+GP DD A I++CDP+ PLM+YVSKM+P SDKGRF+AFGRVFSG
Sbjct: 344 SPAKAQQYRVDTLYDGPLDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSG 403
Query: 73 KVVTGQKARIMGPNFTPG 20
V TG K RIMGPNF PG
Sbjct: 404 TVATGNKVRIMGPNFVPG 421
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = -2
Query: 390 DLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
D+L K+ +T+K E+ + GK L+K VM++WLPA +ALL+MI HL
Sbjct: 298 DMLTKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHL 342
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 75.8 bits (178), Expect = 1e-14
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = -1
Query: 229 RMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKA 50
++E +Y GP D +K CDP APLM+ V+K+ P SD F AFGRV+SG + TGQ
Sbjct: 472 KIEHIYTGPQDSTIVDAMKKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTV 531
Query: 49 RIMGPNFTP 23
R++G ++P
Sbjct: 532 RVLGEGYSP 540
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 62.9 bits (146), Expect = 9e-11
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = -1
Query: 178 IKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPG 20
+++CD E PL++YVSKM KGR++A GRVFSGKV +G + + P++ G
Sbjct: 546 VRNCDAEGPLVLYVSKMTLALGKGRYFALGRVFSGKVTSGMNVQFLSPSYGIG 598
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = -2
Query: 387 LLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHL 256
+L+KI VT+ + G L+K V+++WLPA AL +M+ H+
Sbjct: 477 MLEKIHVTVSSPAKELVGIELVKYVIQAWLPACSALSEMMMYHI 520
>04_01_0099 +
1029785-1030039,1030269-1030357,1030484-1030541,
1030643-1030960,1031043-1031165,1031698-1031901,
1031982-1032041
Length = 368
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 104 FLRLWTRFLWQGCYRTKSSHHGTKLYTWIVFSYK 3
F LWTR + C + H +Y W+VF+YK
Sbjct: 122 FSYLWTRLIKLLCVTLFALHFAACIYLWMVFNYK 155
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 360 KHEDSDKDGKALLKVVMRSWLPAGEALLQMI 268
+ E +KD K +L+ VM WLP +A++ M+
Sbjct: 315 QRELQNKDPKVVLQAVMSRWLPLADAVMTMV 345
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 103 FYAFGRVFSGKVVTGQKARIMGPNFTP 23
F AF RVF G + GQK ++ P + P
Sbjct: 439 FMAFARVFCGVLRAGQKVFVLSPLYDP 465
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 30.7 bits (66), Expect = 0.43
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -1
Query: 187 AIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 44
++ + S D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 30.7 bits (66), Expect = 0.43
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -1
Query: 187 AIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 44
++ + S D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>06_01_1022 + 7992901-7994676
Length = 591
Score = 29.9 bits (64), Expect = 0.75
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 104 FLRLWTRFLWQGCYRTKSSHHGTKLYTWIVFSYK 3
F LWTR + C + H +Y W+ F+YK
Sbjct: 163 FNYLWTRLIKLLCVTLFALHFAACIYLWMAFNYK 196
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 292 W*SSASDDC---HSFTSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 131
W +SA D H+ V+ + + LY G HDD+ I D P+++Y+S+
Sbjct: 548 WAASAPDHAKGNHAGILQVMLKPPSPDPLY-GMHDDDQMIDFSDVDIRLPMLVYMSR 603
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 27.5 bits (58), Expect = 4.0
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = -1
Query: 250 PVVAQKYRMEMLY-EGPHDDEAAIGIKSCDPEAPLM-MYVS--KMVPTS----DKGRFYA 95
P+ AQ Y E Y + +A+G K+ P P+M MY + P +
Sbjct: 191 PMTAQPYYPESSYGQQQQKTYSAVGNKAEGPPPPVMRMYAQGPQQQPVEFQLKETSPTLG 250
Query: 94 FGRVFSGKVVTGQKA 50
GRV G+V+ G+KA
Sbjct: 251 GGRVIGGRVIPGEKA 265
>05_04_0249 -
19365952-19366020,19366097-19366211,19366450-19366520,
19366759-19366797,19367156-19367238,19367366-19367438,
19367826-19367884,19368457-19368511
Length = 187
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1
Query: 163 PEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPG 20
P+ P+++Y K T +G+ + F +F+G+ + GP+ T G
Sbjct: 139 PQFPILVYF-KETQTKPEGQIHFFPVIFNGRQLYDAMVERAGPSETSG 185
>02_01_0620 +
4650572-4650671,4650755-4650891,4651012-4651205,
4651287-4651571,4652111-4652169,4652469-4652540,
4652817-4652925,4653239-4653980
Length = 565
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 95 LWTRFLWQGCYRTKSSHHGTKLYTWIVFSY 6
LW +F ++GCY+T S +G + T ++ Y
Sbjct: 289 LWDKF-FEGCYKTGSCCNGIDILTILLHEY 317
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 114 TKVVSTPLDAFSLARLLPDKKLASWDQTLH 25
TK + PL+ LA LL KK WD +H
Sbjct: 393 TKGSNLPLNIVMLAGLLRSKKEDEWDAVIH 422
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 195 SSWGPSYNISIRYFWATTGDVNEWQSSEAELHQQATKSASQP 320
SSW P ++ + FW T Q + +++ TK SQP
Sbjct: 95 SSWRPPCSLKEKNFWECTEFNTRVQQVDKLQNREPTKKKSQP 136
>03_06_0213 - 32406047-32406742
Length = 231
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 105 RPLSEVGTILLTYIISGASGSQLLIPMAASSSWGPSYNISIRYFWA 242
RP+SE ++L Y+ G+ L+P A S +Y + FWA
Sbjct: 64 RPVSE-SLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWA 108
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 31 SLVP*CELFVR*QPCQRKRVQRRRNDLCRRSAPSCSRTSSVG 156
S +P + VR P R ++RRRND RR+A + TSS G
Sbjct: 161 SSMPLTQEDVREGPDARLNIERRRND--RRAAHASEGTSSSG 200
>01_06_0116 - 26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 27.1 bits (57), Expect = 5.3
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +3
Query: 21 PGVKFGPMMRAFCPVTTLPEKTRPKA*KRPLSEVGTILLTYIISGASGSQLLIP-MAASS 197
PGV + PM + V RP PL E L + +G SG P M
Sbjct: 735 PGVSY-PMHES---VDRFSTHMRPFGWPNPLDESCPPHLQ-VWNGGSGVFASEPYMYGRQ 789
Query: 198 SWGPSYNISIRYFWATTGDVNEWQSSEAELHQQATKSASQPSA 326
W + S+ W TTGD + Q+ E TK SA
Sbjct: 790 EWDQNRQHSVSRGWETTGDALKGQNELHEREPSVTKKEPDCSA 832
>11_06_0584 - 25220371-25222917
Length = 848
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 261 HLHHL*WPRNIVWRCYMRDPTMMK 190
H H L W ++ + CY R P +MK
Sbjct: 402 HQHKLRWTQSTICCCYCRVPRIMK 425
>07_03_0230 +
15526504-15526673,15526809-15526867,15527135-15527139,
15528165-15528268,15528362-15528437,15528646-15528704,
15528803-15528868,15529372-15529455,15529608-15529672,
15529758-15529840,15529949-15530039,15530142-15530194,
15530285-15530428,15530562-15530675
Length = 390
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 195 SSWGPSYNISIRYFWATTGDVNE-WQSSEAEL-HQQATKSASQP 320
++WG Y S W TTGD+N+ W S + + A+ S ++P
Sbjct: 186 ATWGGQYGNS----WRTTGDINDSWASMLSNIDSNDASASYAKP 225
>02_05_0596 +
30239186-30239567,30239642-30239742,30240680-30240777,
30241448-30241656,30241754-30241806,30242069-30242137
Length = 303
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 252 DVNEWQSSEAELHQQATKSASQPSAKLC 335
D+NEWQ+ A L A K S+ +LC
Sbjct: 144 DLNEWQARHATLVLSAVKEISKFRYELC 171
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 97 RRNDLCRRSAPSCSRTSSVGLQDHSS*YQWQLHHRGVP 210
R+ L S+PS S TSS G SS + HR VP
Sbjct: 118 RKRSLSGGSSPSSSNTSSAGSLSSSSRSISRQLHRSVP 155
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 70 PCQRKRVQRRRNDLCRRSAP 129
P ++KR+ RR +L R++AP
Sbjct: 68 PSEKKRLDRRHKELLRKAAP 87
>03_01_0317 +
2492030-2492591,2493189-2493249,2493951-2494066,
2494662-2495176
Length = 417
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 21 PGVKFGPMMRAFCPVTTLPEKTRPKA*KRPLSEVGTILLTYIISGASGS 167
P V GP A P+ P+ TRP LS + +LL +++S S S
Sbjct: 3 PSVPAGPAATAALPLAVFPKDTRPLP-CLLLSCLLLLLLLHLLSSPSSS 50
>02_05_0451 +
29123899-29123906,29124564-29124834,29125107-29125265,
29125439-29125543
Length = 180
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 26 CKVWSHDASFLSGNNLARENASKGVETTFVGGRHHLAHVHHQWGF 160
C+ W H ++ + N E+ V+ T G HH H++ Q F
Sbjct: 125 CQAWVHGSAAMMWNVRNPESKEDRVDATNTRG-HHAIHLNSQQHF 168
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 107 SFLRLWTRFLWQGCYRTKSSHHGTKLYTWI 18
+++ +T L CYRT HG + YT++
Sbjct: 97 AYITYYTAVLLCDCYRTPDPVHGKRNYTYM 126
>01_05_0215 +
19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 100 RNDLCRRSAPSCSRTSSVGLQDHSS*YQWQLHHRGVPHITSPYDISGPLQVM*MNGNHLK 279
RND R S +R+ ++ + +S H G TS D+S P++V + H+K
Sbjct: 554 RNDFDSRIINSKTRSQNISFRKSTS-KSSSFGHSGTHPFTSTCDLSDPMEV--HDDQHIK 610
Query: 280 QS 285
++
Sbjct: 611 ET 612
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,147,963
Number of Sequences: 37544
Number of extensions: 263011
Number of successful extensions: 808
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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