Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0911
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = +2

Query: 113 NTDEPSGAMLEALRSLLRCGVERGHLAGDYRVVAHRQLIASESPGRKPTTRYDAGL 280
           N D+  GA    LR L  CG+ R    G  R            P + P T YD G+
Sbjct: 398 NADQTPGAYWIQLRGLGECGIRRVQQLGILRYAK-----GPYQPSQAPPT-YDYGI 447


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = +2

Query: 113 NTDEPSGAMLEALRSLLRCGVERGHLAGDYRVVAHRQLIASESPGRKPTTRYDAGL 280
           N D+  GA    LR L  CG+ R    G  R            P + P T YD G+
Sbjct: 398 NADQTPGAYWIQLRGLGECGIRRVQQLGILRYAK-----GPYQPSQAPPT-YDYGI 447


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 227 IASESPGRKPTTRYDAGLSGWRTWTPSRTRNII 325
           +A+ +PG   + R+ A  S W      + +N++
Sbjct: 346 MANAAPGNSASNRHSAWQSHWLNKGAEQAKNVL 378


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 213 ATTR*SPARWPRSTPQRSSDRSASSIAPLGSSVLKLP 103
           ATT  +PA +  S+P  SS + +SS A    +    P
Sbjct: 27  ATTE-APAAYSSSSPSGSSPQHSSSSASTSPAARMYP 62


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 213 ATTR*SPARWPRSTPQRSSDRSASSIAPLGSSVLKLP 103
           ATT  +PA +  S+P  SS + +SS A    +    P
Sbjct: 27  ATTE-APAAYSSSSPSGSSPQHSSSSASTSPAARMYP 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,565
Number of Sequences: 336
Number of extensions: 3657
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)