Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0900
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
>SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
>SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 113 KNYLRDNSVIFFLVQIKRKVCDLDVGLR 196
K+Y DNSVI I VCDLDV LR
Sbjct: 10 KSYHGDNSVISLESLIDNDVCDLDVELR 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,580,695
Number of Sequences: 59808
Number of extensions: 138760
Number of successful extensions: 176
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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