Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0894
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 409 YNFSIFELESHMTQRVFV*SYISL--EWPITNSHGDIICRSFL 287
           YNF  F LE  + Q++   +Y+ L   W + ++   I    FL
Sbjct: 27  YNFEKFSLEHQLWQKIQAWTYLILLTTWTVISASTRIKSFKFL 69


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 157 EYLYAMLLLTVLVP 198
           EY+Y ++ L++L+P
Sbjct: 119 EYIYGIIFLSILIP 132


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 157 EYLYAMLLLTVLVP 198
           EY+Y ++ L++L+P
Sbjct: 119 EYIYGIIFLSILIP 132


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -3

Query: 534 TFINNFRYFLSFMPTTF--IVFISSIWWSVNKPFRAADESTTN 412
           +F+N+    +S +      ++F    W S+NK F+  D+   N
Sbjct: 20  SFVNSIFLVMSAVTIILSSLIFNQEQWSSLNKNFQFIDKKLNN 62


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 7    FSQQVVMWLHLYHPS 51
            FS + ++WLHL + S
Sbjct: 985  FSSEKIVWLHLVYIS 999


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,883
Number of Sequences: 336
Number of extensions: 3892
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)