Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0891
         (774 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0CNU4 Cluster: Predicted protein; n=2; Aspergillus ter...    36   1.5  
UniRef50_A7E5X2 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q245Y5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q0CNU4 Cluster: Predicted protein; n=2; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 411

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 272 YKVDKFIQTTNRESLKQFV-ILQYINDSVLVFRLTYLHS*YVYLYINFLITTFISKYLII 96
           YK+  F+ T  R  LK+F    + +ND VL     +L + Y  LY N  +T+ ++ +L++
Sbjct: 174 YKLFNFLPTEFRSRLKKFERSWERLNDEVLAKAREFLQTMYELLYTNIDVTSTVTSFLLL 233


>UniRef50_A7E5X2 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1735

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = -3

Query: 679  IYNKKKKRLHMIFKSMNKLISRALEKNER*TMNE*FSNENVFKQYPKYY 533
            ++ KKK+ LH +FK +  ++ ++ EK  R        N   F+++ ++Y
Sbjct: 1499 VFYKKKESLHSVFKVLEPVVQKSSEKKSRLFGKRFGGNTEFFREFDEFY 1547


>UniRef50_Q245Y5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 765

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 706 LEAWLHVQDIYNKKKKRLHMIFKSMNKLISRALEKNER 593
           +E W    D+ N+K K L + FK  +KL  R L  NE+
Sbjct: 378 IEFWREFNDMMNEKSKELKVAFKENDKLNKRFLFSNEK 415


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,775,531
Number of Sequences: 1657284
Number of extensions: 11459712
Number of successful extensions: 22860
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22803
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)