Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0886
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    47   1e-07
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    46   3e-07
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 20/53 (37%), Positives = 34/53 (64%)
 Frame = +1

Query: 349 NNEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQQL 507
           + E R+AY  ED+GLN +++++H   PF     +    K RRGEI+++ +QQ+
Sbjct: 189 DEEHRVAYWREDIGLNLHHWHWHLVYPF--EGAREIVDKNRRGEIFYYMHQQI 239



 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 74  ACYARVYMNQGMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEV 217
           A + R  +N  +F YA+ +A++ R DT +  LP+    +P  +V+ +V
Sbjct: 111 AVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQV 158



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 507 VARYYMERLTNGLGKIPEFS-WYSPLRTGYLPPFNS 611
           +AR+ +ERL NGL ++ + S W  PL   Y P  +S
Sbjct: 240 IARFNIERLCNGLKRVVKLSNWREPLPEAYFPKLDS 275


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 18/51 (35%), Positives = 34/51 (66%)
 Frame = +1

Query: 355 EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQQL 507
           E R+AY  ED+G+N +++++H   PF   + +    K RRGE++++ +QQ+
Sbjct: 191 EHRLAYFREDLGINLHHWHWHLVYPF--EAAREVVAKNRRGELFYYMHQQI 239



 Score = 41.9 bits (94), Expect = 5e-06
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +2

Query: 50  NFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEV--KN 223
           N +     A YAR  +N  +F YA  +AI+ R DT    LP+  E++P  +V+ +V  K 
Sbjct: 103 NVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAKA 162

Query: 224 KMDYVKMMDGSLT 262
           + +   + +GS T
Sbjct: 163 REEATVVPEGSRT 175



 Score = 25.0 bits (52), Expect = 0.63
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 507 VARYYMERLTNGLGKIPEFSWYS-PLRTGYLPPFNS 611
           +ARY  ERL N L +   F+ ++  ++  Y P  +S
Sbjct: 240 IARYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDS 275


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 367 AYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQQ 504
           A+    V  N  +  FH++  F W      A+ E+    +F FY Q
Sbjct: 109 AWFLPFVVTNIIFVLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQ 154


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 449 LPEFHQNGKCEW 414
           L EFH+NG  EW
Sbjct: 296 LCEFHKNGIIEW 307


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 570 YSPLRTGYLPPFNS 611
           Y PLRT Y   FNS
Sbjct: 34  YGPLRTSYQHHFNS 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 591 YLPPFNSFYYPFAQ 632
           Y P F+ FYYP  Q
Sbjct: 99  YEPSFDLFYYPSRQ 112


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 247 HHLNVVHFIFNFHV 206
           HH++  H + N HV
Sbjct: 328 HHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,834
Number of Sequences: 336
Number of extensions: 3934
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)