Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0886
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec...    30   7.5  
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein...    30   7.5  
BC117271-1|AAI17272.1|  445|Homo sapiens RGS9 protein protein.         30   7.5  
BC096843-1|AAH96843.1|  445|Homo sapiens RGS9 protein protein.         30   7.5  
BC022504-1|AAH22504.1|  622|Homo sapiens RGS9 protein protein.         30   7.5  
AY585191-1|AAT79494.1|  671|Homo sapiens regulator of G-protein ...    30   7.5  
AY585190-1|AAT79493.1|  445|Homo sapiens regulator of G-protein ...    30   7.5  
AF493932-1|AAM12646.1|  445|Homo sapiens regulator of G protein ...    30   7.5  
AF178072-1|AAG09312.1|  671|Homo sapiens RGS9 isoform 2 protein.       30   7.5  
AF178070-1|AAG09311.1|  484|Homo sapiens RGS9 isoform 1 protein.       30   7.5  
AF071476-1|AAC64040.1|  674|Homo sapiens regulator of G-protein ...    30   7.5  
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re...    30   7.5  
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein...    30   7.5  
AK023777-1|BAB14674.1|  928|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
            (AA -19 to 4525) protein.
          Length = 4544

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 699  HKCRGS-EFLRSSSRCATRSHCFFGQMDNKRS*KAGGSQFEEASTRKTQG 553
            HKC  S +FL SS RC   +    GQ D   S    G    E  +RK  G
Sbjct: 2902 HKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSG 2951


>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
            lipoprotein-related protein 1 (alpha-2-macroglobulin
            receptor) protein.
          Length = 4544

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 699  HKCRGS-EFLRSSSRCATRSHCFFGQMDNKRS*KAGGSQFEEASTRKTQG 553
            HKC  S +FL SS RC   +    GQ D   S    G    E  +RK  G
Sbjct: 2902 HKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSG 2951


>BC117271-1|AAI17272.1|  445|Homo sapiens RGS9 protein protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 185 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 218


>BC096843-1|AAH96843.1|  445|Homo sapiens RGS9 protein protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 185 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 218


>BC022504-1|AAH22504.1|  622|Homo sapiens RGS9 protein protein.
          Length = 622

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 362 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 395


>AY585191-1|AAT79494.1|  671|Homo sapiens regulator of G-protein
           signaling 9L protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 411 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 444


>AY585190-1|AAT79493.1|  445|Homo sapiens regulator of G-protein
           signaling 9 protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 185 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 218


>AF493932-1|AAM12646.1|  445|Homo sapiens regulator of G protein
           signalling 9 protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 185 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 218


>AF178072-1|AAG09312.1|  671|Homo sapiens RGS9 isoform 2 protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 411 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 444


>AF178070-1|AAG09311.1|  484|Homo sapiens RGS9 isoform 1 protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 411 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 444


>AF071476-1|AAC64040.1|  674|Homo sapiens regulator of G-protein
           signaling 9L protein.
          Length = 674

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 631 KEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 732
           K+ +  +  P+ TTKK ++  FMRRH  ++ S V
Sbjct: 414 KDMLAKAIEPQETTKKSSTLPFMRRHLRSSPSPV 447


>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
            protein protein.
          Length = 4544

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 699  HKCRGS-EFLRSSSRCATRSHCFFGQMDNKRS*KAGGSQFEEASTRKTQG 553
            HKC  S +FL SS RC   +    GQ D   S    G    E  +RK  G
Sbjct: 2902 HKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSG 2951


>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
           lipoprotein-related protein 1 variant protein.
          Length = 2359

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 699 HKCRGS-EFLRSSSRCATRSHCFFGQMDNKRS*KAGGSQFEEASTRKTQG 553
           HKC  S +FL SS RC   +    GQ D   S    G    E  +RK  G
Sbjct: 718 HKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSG 767


>AK023777-1|BAB14674.1|  928|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13715 fis, clone PLACE2000404, moderately
           similar to PROBABLE LEUCYL-TRNA SYNTHETASE (EC 6.1.1.4).
           ).
          Length = 928

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 564 SWYSPLRTGYLPPFNSFYYPFAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 719
           +W S LR+G    FN     FA   N   + T++NYE++ F++  +  FF++
Sbjct: 532 NWDS-LRSGPASTFNDRV--FASELNAGIIKTDQNYEKMMFIEALKTGFFEF 580


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,758,610
Number of Sequences: 237096
Number of extensions: 2243036
Number of successful extensions: 4761
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4760
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)